RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CLCN4P51793 760 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-206ENST00000459895 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 KCNC3Q14003 757 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 BMS1Q14692 1282 aaKnown RBP13.79□□□□□ -0.2
COL18A1-206ENST00000459895 ZSCAN23Q3MJ62 389 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 ANO6Q4KMQ2 910 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 OVOS1Q6IE37 1185 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 SPOPLQ6IQ16 392 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 ANKS3Q6ZW76 656 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 FRMD5Q7Z6J6 570 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 IRF2BP1Q8IU81 584 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 TRIM59Q8IWR1 403 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 GPR65Q8IYL9 337 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 ADGRF2Q8IZF7 708 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 OR10T2Q8NGX3 314 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 CDCA3Q99618 268 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-206ENST00000459895 RTP3Q9BQQ7 232 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 EMILIN2Q9BXX0 1053 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 UBE2ZQ9H832 354 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-206ENST00000459895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL18A1-206ENST00000459895 CLDND1Q9NY35 253 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 POLIQ9UNA4 740 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 SSX2IPQ9Y2D8 614 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 SNX9Q9Y5X1 595 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 CDY1Q9Y6F8 540 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 CYB561D2O14569 222 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 HCRTO43612 131 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 LRRN2O75325 713 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 STAU1O95793 577 aaKnown RBP13.78□□□□□ -0.2
COL18A1-206ENST00000459895 OR4Q2P0C623 313 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 GTF2H1P32780 548 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
COL18A1-206ENST00000459895 ROR1Q01973 937 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
COL18A1-206ENST00000459895 TRPC3Q13507 836 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
COL18A1-206ENST00000459895 TPD52L1Q16890 204 aaPredicted RBP13.78□□□□□ -0.2
COL18A1-206ENST00000459895 CCDC142Q17RM4 750 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 CTC1Q2NKJ3 1217 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 CTXN3Q4LDR2 81 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 KRT39Q6A163 491 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 OSTM1Q86WC4 334 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 AOPEPQ8N6M6 819 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 APPL2Q8NEU8 664 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 SLC22A17Q8WUG5 538 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 KBTBD7Q8WVZ9 684 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 SEMA4DQ92854 862 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 PABPC5Q96DU9 382 aaKnown RBP13.78□□□□□ -0.2
COL18A1-206ENST00000459895 TMEM209Q96SK2 561 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 PI4K2AQ9BTU6 479 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
COL18A1-206ENST00000459895 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 FBXL5Q9UKA1 691 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 NFE2L3Q9Y4A8 694 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 BACE2Q9Y5Z0 518 aa13.78□□□□□ -0.2
COL18A1-206ENST00000459895 FSD2A1L4K1 749 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 WDR27A2RRH5 827 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 TGM5O43548 720 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 TBC1D4O60343 1298 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 STX10O60499 249 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 GNA14O95837 355 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 GLUD1P00367 558 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 ASS1P00966 412 aaKnown RBP13.77□□□□□ -0.21
COL18A1-206ENST00000459895 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 PAX3P23760 479 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 KLRC2P26717 231 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 LTBRP36941 435 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 ASPAP45381 313 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 RAP1GAPP47736 663 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 FMO5P49326 533 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 TNNC1P63316 161 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 MYL5Q02045 173 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 SOWAHAQ2M3V2 549 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 SKOR2Q2VWA4 1001 aaPredicted RBP13.77□□□□□ -0.21
COL18A1-206ENST00000459895 SLC8B1Q6J4K2 584 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 EP400NLQ6ZTU2 488 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 TOP6BLQ8N6T0 577 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 FEZF2Q8TBJ5 459 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 SDCBP2Q9H190 292 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 VRTNQ9H8Y1 702 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 APOBEC3GQ9HC16 384 aaKnown RBP13.77□□□□□ -0.21
COL18A1-206ENST00000459895 MAN1C1Q9NR34 630 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 BRWD1Q9NSI6 2320 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 CLEC1BQ9P126 229 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 DSEQ9UL01 958 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 R3HCC1Q9Y3T6 440 aaKnown RBP13.77□□□□□ -0.21
COL18A1-206ENST00000459895 NME7Q9Y5B8 376 aa13.77□□□□□ -0.21
COL18A1-206ENST00000459895 ARHGEF37A1IGU5 675 aa13.76□□□□□ -0.21
COL18A1-206ENST00000459895 H3BQ06 376 aaPredicted RBP13.76□□□□□ -0.21
COL18A1-206ENST00000459895 H7C4K7 107 aa13.76□□□□□ -0.21
COL18A1-206ENST00000459895 HUS1O60921 280 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms