RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 CAPNS2Q96L46 248 aa17.41■□□□□ 0.38
MBD1-210ENST00000457839 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.41■□□□□ 0.387e-7■■□□□ 13.3
MBD1-210ENST00000457839 SPOPO43791 374 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 CTSHP09668 335 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 TCEAL1Q15170 157 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 DPH6Q7L8W6 267 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 FUT8Q9BYC5 575 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 TUBGCP4Q9UGJ1 667 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 PRDM4Q9UKN5 801 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 KRIT1O00522 736 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 TRPA1O75762 1119 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 RECQL4O94761 1208 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 MTA2O94776 668 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 GLI1P08151 1106 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 GJA9P57773 515 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 NOGQ13253 232 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 DCAF4L1Q3SXM0 396 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 GDF6Q6KF10 455 aaPredicted RBP17.4■□□□□ 0.38
MBD1-210ENST00000457839 HHIPL1Q96JK4 782 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 RNPC3Q96LT9 517 aaKnown RBP17.4■□□□□ 0.38
MBD1-210ENST00000457839 BCO2Q9BYV7 579 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 DDX47Q9H0S4 455 aaKnown RBP17.4■□□□□ 0.38
MBD1-210ENST00000457839 UVRAGQ9P2Y5 699 aa17.4■□□□□ 0.38
MBD1-210ENST00000457839 RARBP10826 455 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 PRKAR2AP13861 404 aaKnown RBP17.39■□□□□ 0.37
MBD1-210ENST00000457839 TRADDQ15628 312 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 WDTC1Q8N5D0 677 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 WHAMMQ8TF30 809 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 TMEM59LQ9UK28 342 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 C2CD2Q9Y426 696 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 TARSL2A2RTX5 802 aaKnown RBP17.39■□□□□ 0.37
MBD1-210ENST00000457839 CES2O00748 559 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 SEPT4O43236 478 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 RAD23BP54727 409 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 CDC42EP1Q00587 391 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 SP3Q02447 781 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 PTP4A2Q12974 167 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 RASGEF1CQ8N431 466 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 MTG1Q9BT17 334 aaPredicted RBP17.39■□□□□ 0.37
MBD1-210ENST00000457839 TJP2Q9UDY2 1190 aa17.39■□□□□ 0.37
MBD1-210ENST00000457839 ALDH1A1P00352 501 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 HOXC8P31273 242 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 KYAT1Q16773 422 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 CCDC70Q6NSX1 233 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 DENND1BQ6P3S1 775 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 SNX27Q96L92 541 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 OSBPL7Q9BZF2 842 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 ELOVL4Q9GZR5 314 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 XPNPEP3Q9NQH7 507 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 O00370 1275 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 RAD51CO43502 376 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 ERLIN1O75477 346 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 PYGMP11217 842 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 GNAT1P11488 350 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 PEX5P50542 639 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 RPL7AP62424 266 aaKnown RBP17.38■□□□□ 0.37
MBD1-210ENST00000457839 MAMLD1Q13495 774 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 CYP4A22Q5TCH4 519 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 TRIM72Q6ZMU5 477 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 HNRNPLLQ8WVV9 542 aaKnown RBP17.38■□□□□ 0.37
MBD1-210ENST00000457839 CD101Q93033 1021 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 STIM2Q9P246 746 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 PARP2Q9UGN5 583 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 L1RE1Q9UN81 338 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 SCN1AP35498 2009 aa17.38■□□□□ 0.37
MBD1-210ENST00000457839 ASGR1P07306 291 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 CRYBB1P53674 252 aaPredicted RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 YARSP54577 528 aaKnown RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 RBP5P82980 135 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 CCNI2Q6ZMN8 369 aaPredicted RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 SESTD1Q86VW0 696 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 SLC4A11Q8NBS3 891 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 RPS6KC1Q96S38 1066 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 CARD9Q9H257 536 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 GOLGA2P5Q9HBQ8 144 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 ST7Q9NRC1 585 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 GTF2IRD1Q9UHL9 959 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 CYTH4Q9UIA0 394 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 ITGA11Q9UKX5 1188 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 MYO1FO00160 1098 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 TOMM70O94826 608 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 HEXIM1O94992 359 aaKnown RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 MMP8P22894 467 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 GUCY2DQ02846 1103 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 NFX1Q12986 1120 aaKnown RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 KCNA10Q16322 511 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 FAM228AQ86W67 206 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 PHF13Q86YI8 300 aaPredicted RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 UBL4BQ8N7F7 174 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 ARRDC4Q8NCT1 418 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 CELF4Q9BZC1 486 aaKnown RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 ERVK-5Q9HDB9 667 aa17.37■□□□□ 0.37
MBD1-210ENST00000457839 AVENQ9NQS1 362 aaPredicted RBP17.37■□□□□ 0.37
MBD1-210ENST00000457839 MKI67P46013 3256 aaKnown RBP17.36■□□□□ 0.37
MBD1-210ENST00000457839 MEIS3P2A8K0S8 358 aa17.36■□□□□ 0.37
MBD1-210ENST00000457839 SART1O43290 800 aaKnown RBP17.36■□□□□ 0.37
MBD1-210ENST00000457839 ADAMTS4O75173 837 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms