RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 GJB6O95452 261 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 MYL6P60660 151 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 CAV1Q03135 178 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 MCL1Q07820 350 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 IFT88Q13099 833 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 QPCTQ16769 361 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 MFSD5Q6N075 450 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 GADL1Q6ZQY3 521 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 EEPD1Q7L9B9 569 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 CCDC25Q86WR0 208 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 TCP11Q8WWU5 503 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 FGD4Q96M96 766 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 MYCBPQ99417 103 aaPredicted RBP19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 GPR20Q99678 358 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 IP6K2Q9UHH9 426 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 DDX20Q9UHI6 824 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 CPSF3Q9UKF6 684 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 OTOFQ9HC10 1997 aa19.5■□□□□ 0.71
SEMA3B-209ENST00000456560 TMEM191CA6NGB0 347 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 SMIM23A6NLE4 172 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 RASGRF2O14827 1237 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 IRF6O14896 467 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 TMEM191BP0C7N4 346 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 ITGA8P53708 1063 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 CCDC50Q8IVM0 306 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 TCHPQ9BT92 498 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 DDX23Q9BUQ8 820 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 MTMR12Q9C0I1 747 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 CSADQ9Y600 493 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 A0A0G2JLL6 359 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 GAS2O43903 313 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 LSM8O95777 96 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 PRKCBP05771 671 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 SRGAP2CP0DJJ0 459 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 CHN1P15882 459 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 DRD4P21917 467 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 MXD4Q14582 209 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 SURF1Q15526 300 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 TRIP13Q15645 432 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 DPY19L2Q6NUT2 758 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 PRRT2Q7Z6L0 340 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 USTQ9Y2C2 406 aa19.49■□□□□ 0.71
SEMA3B-209ENST00000456560 PROZP22891 400 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 RPL7AP62424 266 aaKnown RBP19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 DUOXA2Q1HG44 320 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 SGSM1Q2NKQ1 1148 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 PLPPR4Q7Z2D5 763 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 ATXN2LQ8WWM7 1075 aaKnown RBP19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 NIF3L1Q9GZT8 377 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 STMN4Q9H169 189 aaPredicted RBP19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 CALB1P05937 261 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 ATF2P15336 505 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 CD58P19256 250 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 ACTN3Q08043 901 aaPredicted RBP19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 HSDL1Q3SXM5 330 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 CELF3Q5SZQ8 465 aaKnown RBP19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 SMYD5Q6GMV2 418 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 ZBTB8OSQ8IWT0 167 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 RNF149Q8NC42 400 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 SCLT1Q96NL6 688 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 TRAIPQ9BWF2 469 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 CISHQ9NSE2 258 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 ANAPC5Q9UJX4 755 aa19.48■□□□□ 0.71
SEMA3B-209ENST00000456560 HOXC6P09630 235 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 MARK3P27448 753 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ADCY8P40145 1251 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 SLCO1A2P46721 670 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ZNF252P-AS1Q0IIN9 211 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 PLCB4Q15147 1175 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 MAPK6Q16659 721 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ARMC9Q7Z3E5 817 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 TRIM50Q86XT4 487 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 EXOC8Q8IYI6 725 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 RCOR2Q8IZ40 523 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 LRRC71Q8N4P6 559 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 SEC16BQ96JE7 1060 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 CCDC114Q96M63 670 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ASCC2Q9H1I8 757 aaPredicted RBP19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 C2orf40Q9H1Z8 148 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 PTPRHQ9HD43 1115 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 TTC4O95801 387 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 BRD2P25440 801 aaKnown RBP19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 CDH5P33151 784 aaPredicted RBP19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 NFX1Q12986 1120 aaKnown RBP19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 TSHZ1Q6ZSZ6 1077 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 WDTC1Q8N5D0 677 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 GPATCH11Q8N954 259 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ZNF317Q96PQ6 595 aaPredicted RBP19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 SELENOSQ9BQE4 189 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ZNF518BQ9C0D4 1074 aa19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
SEMA3B-209ENST00000456560 ADM5C9JUS6 153 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 SLC25A27O95847 323 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 PGK2P07205 417 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 TCF4P15884 667 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 SSR1P43307 286 aaKnown RBP19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 ATP13A4Q4VNC1 1196 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 PPP1R15BQ5SWA1 713 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 LRRC38Q5VT99 294 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 FAM212AQ96EL1 285 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms