RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 CITO14578 2027 aa17.07■□□□□ 0.32
NELFE-207ENST00000454913 PRAMEF12O95522 483 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 GABRR2P28476 465 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 RDXP35241 583 aaKnown RBP17.06■□□□□ 0.32
NELFE-207ENST00000454913 MCM2P49736 904 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 IRX4P78413 519 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 SIM1P81133 766 aaPredicted RBP17.06■□□□□ 0.32
NELFE-207ENST00000454913 PROSER1Q86XN7 944 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 BSNDQ8WZ55 320 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 DDX12PQ92771 950 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 SUSD3Q96L08 255 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 CCDC113Q9H0I3 377 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 GKN1Q9NS71 199 aa17.06■□□□□ 0.32
NELFE-207ENST00000454913 FLNBO75369 2602 aaKnown RBP17.06■□□□□ 0.32
NELFE-207ENST00000454913 ZNF638Q14966 1978 aaKnown RBP17.06■□□□□ 0.32
NELFE-207ENST00000454913 LOC400499M0QZD8 3231 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 SPAARA0A1B0GVQ0 90 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 NAMPTP43490 491 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 MAPK8P45983 427 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 DUSP4Q13115 394 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 COL28A1Q2UY09 1125 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 PMS2CLQ68D20 193 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 GAREM2Q75VX8 874 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 FAM177A1Q8N128 213 aaPredicted RBP17.05■□□□□ 0.32
NELFE-207ENST00000454913 CEP120Q8N960 986 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 RPLP0P6Q8NHW5 317 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 TBC1D32Q96NH3 1257 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 SMG9Q9H0W8 520 aaKnown RBP17.05■□□□□ 0.32
NELFE-207ENST00000454913 GPSM3Q9Y4H4 160 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 IGSF10Q6WRI0 2623 aa17.05■□□□□ 0.32
NELFE-207ENST00000454913 TRDMT1O14717 391 aaKnown RBP17.04■□□□□ 0.32
NELFE-207ENST00000454913 FGF19O95750 216 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 OR4Q2P0C623 313 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 RPL9P32969 192 aaKnown RBP17.04■□□□□ 0.32
NELFE-207ENST00000454913 DHPSP49366 369 aaPredicted RBP17.04■□□□□ 0.32
NELFE-207ENST00000454913 CYP4F8P98187 520 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 AMPD2Q01433 879 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 YWHAHQ04917 246 aaPredicted RBP17.04■□□□□ 0.32
NELFE-207ENST00000454913 PSMD2Q13200 908 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 RUNX3Q13761 415 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 DMC1Q14565 340 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 USP39Q53GS9 565 aaKnown RBP17.04■□□□□ 0.32
NELFE-207ENST00000454913 C11orf74Q86VG3 221 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 PIGKQ92643 395 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 TPSD1Q9BZJ3 242 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 EBF3Q9H4W6 596 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 ANKFY1Q9P2R3 1169 aa17.04■□□□□ 0.32
NELFE-207ENST00000454913 MYO16Q9Y6X6 1858 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 LAMA5O15230 3695 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 MEFVO15553 781 aaPredicted RBP17.03■□□□□ 0.32
NELFE-207ENST00000454913 DRD1P21728 446 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 GRM5P41594 1212 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 LMAN2Q12907 356 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 PPP2R5AQ15172 486 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 CALCRLQ16602 461 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 ZNF568Q3ZCX4 644 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 NT5DC1Q5TFE4 455 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 TRIM68Q6AZZ1 485 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 CPLX2Q6PUV4 134 aaKnown RBP17.03■□□□□ 0.32
NELFE-207ENST00000454913 SYT13Q7L8C5 426 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 DNAJB7Q7Z6W7 309 aaPredicted RBP17.03■□□□□ 0.32
NELFE-207ENST00000454913 FBXL16Q8N461 479 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 C18orf25Q96B23 403 aaPredicted RBP17.03■□□□□ 0.32
NELFE-207ENST00000454913 ZMAT2Q96NC0 199 aaKnown RBP17.03■□□□□ 0.32
NELFE-207ENST00000454913 GCNAQ96QF7 691 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 NUSAP1Q9BXS6 441 aaKnown RBP17.03■□□□□ 0.32
NELFE-207ENST00000454913 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 CRISPLD1Q9H336 500 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 TASP1Q9H6P5 420 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 TTC12Q9H892 705 aaPredicted RBP17.03■□□□□ 0.32
NELFE-207ENST00000454913 EBF1Q9UH73 591 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 PCDHB8Q9UN66 801 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 SLC27A5Q9Y2P5 690 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 ASB3Q9Y575 518 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 FREM2Q5SZK8 3169 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 KIAA1549LQ6ZVL6 1849 aa17.03■□□□□ 0.32
NELFE-207ENST00000454913 SMG1Q96Q15 3661 aaKnown RBP17.02■□□□□ 0.32
NELFE-207ENST00000454913 PCNX2A6NKB5 2137 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 VNN2O95498 520 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
NELFE-207ENST00000454913 U2AF2P26368 475 aaKnown RBP eCLIP17.02■□□□□ 0.32
NELFE-207ENST00000454913 TXKP42681 527 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 FBXO43Q4G163 708 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 TRIM61Q5EBN2 209 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 ITIH5Q86UX2 942 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 CHCHD4Q8N4Q1 142 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 BEST2Q8NFU1 509 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 TSTD1Q8NFU3 115 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 PSMG2Q969U7 264 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 EXOC4Q96A65 974 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 ACDQ96AP0 544 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 IFT74Q96LB3 600 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 POLR3CQ9BUI4 534 aaPredicted RBP17.02■□□□□ 0.32
NELFE-207ENST00000454913 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
NELFE-207ENST00000454913 HPS4Q9NQG7 708 aa17.02■□□□□ 0.32
NELFE-207ENST00000454913 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.32
NELFE-207ENST00000454913 TIMM13Q9Y5L4 95 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms