RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZNF200P98182 395 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 DR1Q01658 176 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 C17orf99Q6UX52 265 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 RUFY4Q6ZNE9 571 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 PHF13Q86YI8 300 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 DNAJB3Q8WWF6 145 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 KAT2BQ92831 832 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 MAGOHBQ96A72 148 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 C18orf8Q96DM3 657 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 KIF12Q96FN5 646 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TRIM51Q9BSJ1 452 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLITRK6Q9H5Y7 841 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 SMYD3Q9H7B4 428 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZFYVE28Q9HCC9 887 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 RNF19AQ9NV58 838 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TCRBV7S2A1N4TA0A589 114 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 ERICH4A6NGS2 130 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 DAPK3O43293 454 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 F2P00734 622 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CTNNA2P26232 953 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 RGS2P41220 211 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 YWHAEP62258 255 aaKnown RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CLUL1Q15846 466 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZFYVE27Q5T4F4 411 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 TSEN2Q8NCE0 465 aaKnown RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 TMEM35BQ8NCS4 154 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 HPDLQ96IR7 371 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 APOL6Q9BWW8 343 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 SDCBP2Q9H190 292 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 ADAMTS10Q9H324 1103 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 ASB7Q9H672 318 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 PARVAQ9NVD7 372 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 DPP3Q9NY33 737 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 SNTG2Q9NY99 539 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CALCOCO1Q9P1Z2 691 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 FAN1Q9Y2M0 1017 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 HES2Q9Y543 173 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 EVPLQ92817 2033 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 TREHO43280 583 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 GPR32O75388 356 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CAPN2P17655 700 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 MMP8P22894 467 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 PSEN2P49810 448 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CPT1AP50416 773 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 RPL7AP62424 266 aaKnown RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CRHR2Q13324 411 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 HIC1Q14526 733 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 KYAT1Q16773 422 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CYP4A22Q5TCH4 519 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 PAXIP1Q6ZW49 1069 aaPredicted RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 ERICH1Q86X53 443 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CCDC50Q8IVM0 306 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 FEZF2Q8TBJ5 459 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CAVIN3Q969G5 261 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 VCPIP1Q96JH7 1222 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 EIF2AQ9BY44 585 aaKnown RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 TRIM6Q9C030 488 aaPredicted RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 CXCL16Q9H2A7 254 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 MTUS1Q9ULD2 1270 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 ABT1Q9ULW3 272 aaKnown RBP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 SCINQ9Y6U3 715 aa10.12□□□□□ -0.79
COL6A4P1-201ENST00000446690 HSF2BPO75031 334 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PROSCO94903 275 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 SYF2O95926 243 aaKnown RBP10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 HOXA11P31270 313 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLC1A1P43005 524 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PTP4A2Q12974 167 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 DENND1BQ6P3S1 775 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 DCUN1D2Q6PH85 259 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLC13A5Q86YT5 568 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZDHHC14Q8IZN3 488 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 WDTC1Q8N5D0 677 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 GOLGA6L1Q8N7Z2 621 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PRELID2Q8N945 189 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 HEXIM2Q96MH2 286 aaKnown RBP10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 RUFY1Q96T51 708 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PLVAPQ9BX97 442 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 MED4Q9NPJ6 270 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 HMGXB4Q9UGU5 601 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PTPN22Q9Y2R2 807 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 CENPFP49454 3210 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 SMIM35A0A1B0GVV1 85 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 AGPSO00116 658 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 MED7O43513 233 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PHF2O75151 1096 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 LSM8O95777 96 aaKnown RBP10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 CALB1P05937 261 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 RARAP10276 462 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 P4HA1P13674 534 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 GRM5P41594 1212 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 RAD23BP54727 409 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 RBP5P82980 135 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 SNX1Q13596 522 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 CUL1Q13616 776 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PPP2R5EQ16537 467 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 GLRA4Q5JXX5 417 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms