RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CUL2Q13617 745 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 SOWAHAQ2M3V2 549 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 SV2CQ496J9 727 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 PLPP4Q5VZY2 271 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 DPY19L2P1Q6NXN4 242 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 SARM1Q6SZW1 724 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 CACNA2D4Q7Z3S7 1137 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 VSTM4Q8IW00 320 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 CMTR2Q8IYT2 770 aaKnown RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 TDHQ8IZJ6 230 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 PDCL2Q8N4E4 241 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 CCDC150Q8NCX0 1101 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 OR6B3Q8NGW1 331 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 RSPH1Q8WYR4 309 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 JAKMIP2Q96AA8 810 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 ZNF830Q96NB3 372 aaPredicted RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 TWNKQ96RR1 684 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 COLEC11Q9BWP8 271 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 MRPL9Q9BYD2 267 aaKnown RBP8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 IMPG2Q9BZV3 1241 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 KANSL3Q9P2N6 904 aa8.1□□□□□ -1.11
SF3A3P1-201ENST00000446317 RANBP2P49792 3224 aaKnown RBP8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 TRIP11Q15643 1979 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 LRRC10BA6NIK2 292 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 LRRC53A6NM62 1247 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 PIK3R2O00459 728 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 SOX1O00570 391 aaPredicted RBP8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 GRM6O15303 877 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 CYP26A1O43174 497 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 ADAM12O43184 909 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 FGF18O76093 207 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 GYPCP04921 128 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 CFHP08603 1231 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 LINC00271P0C7V0 271 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 SPATA31D3P0C874 917 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 UCHL3P15374 230 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 LRPAP1P30533 357 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 NDST1P52848 882 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 TAP1Q03518 808 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 CETN1Q12798 172 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 MYO1EQ12965 1108 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 DRAP1Q14919 205 aaPredicted RBP8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 SGSM1Q2NKQ1 1148 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 RTP2Q5QGT7 225 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 KIAA0319Q5VV43 1072 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 FUT10Q6P4F1 479 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 DCLRE1AQ6PJP8 1040 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 TMEM270Q6UE05 265 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 SPATA31D4Q6ZUB0 917 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 PHLDB2Q86SQ0 1253 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 ACOT1Q86TX2 421 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 PPFIBP1Q86W92 1011 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 PASD1Q8IV76 773 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 ADGRF2Q8IZF7 708 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 SLC39A11Q8N1S5 342 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 RIN2Q8WYP3 895 aaPredicted RBP8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 IGSF21Q96ID5 467 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 LRCH3Q96II8 777 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 ZNF560Q96MR9 790 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 PGLYRP2Q96PD5 576 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 GPR88Q9GZN0 384 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 ELOVL4Q9GZR5 314 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 NIF3L1Q9GZT8 377 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 SNX25Q9H3E2 840 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 CISHQ9NSE2 258 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 FAM49BQ9NUQ9 324 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 SEPT11Q9NVA2 429 aaKnown RBP8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 ADAM28Q9UKQ2 775 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 FNDC1Q4ZHG4 1894 aaPredicted RBP8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 KIAA1671Q9BY89 1806 aa8.09□□□□□ -1.11
SF3A3P1-201ENST00000446317 CHD9Q3L8U1 2897 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 TDRD15B5MCY1 1934 aaKnown RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 A8MXQ7 604 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 FOXN3O00409 490 aaPredicted RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 CLDN5O00501 218 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 CITO14578 2027 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 INPPL1O15357 1258 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 HUS1O60921 280 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 SOAT2O75908 522 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 PTMAP06454 111 aaKnown RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 TPM3P06753 285 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 PLEKP08567 350 aaPredicted RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 CCDC130P13994 396 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 CD19P15391 556 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 LAG3P18627 525 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 CYP3A5P20815 502 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 BRD2P25440 801 aaKnown RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 ADORA2BP29275 332 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 IRS1P35568 1242 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 AP3M2P53677 418 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 SPECC1LQ69YQ0 1117 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 RSPO2Q6UXX9 243 aaPredicted RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 CCDC186Q7Z3E2 898 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 RBM23Q86U06 439 aaKnown RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 VPS52Q8N1B4 723 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms