RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TUFT1	Q9NNX1	390 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	C1orf112	Q9NSG2	853 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	SLC17A7	Q9P2U7	560 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	GABBR1	Q9UBS5	961 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	IVNS1ABP	Q9Y6Y0	642 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	TBX3	O15119	743 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	CSDE1	O75534	798 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	FAM155B	O75949	473 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ACAD10	Q6JQN1	1059 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	SWSAP1	Q6NVH7	229 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	MBOAT7	Q96N66	472 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	CCDC77	Q9BR77	488 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	MAK16	Q9BXY0	300 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	GLT8D2	Q9H1C3	349 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	KIAA1586	Q9HCI6	787 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	RNF19A	Q9NV58	838 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ZSCAN9	O15535	394 aa	Predicted RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	CD19	P15391	556 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	QARS	P47897	775 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	BASP1	P80723	227 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ROR2	Q01974	943 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	CRY2	Q49AN0	593 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	C11orf63	Q6NUN7	778 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ARHGEF18	Q6ZSZ5	1173 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ZC3H18	Q86VM9	953 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	WNK4	Q96J92	1243 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	SMC6	Q96SB8	1091 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	TBC1D10A	Q9BXI6	508 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	FAM47DP	A6NHR8	397 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	AVIL	O75366	819 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ZNF189	O75820	626 aa	Predicted RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	FES	P07332	822 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ADRA2B	P18089	450 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	IVD	P26440	423 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	MUM1	Q2TAK8	710 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	BRDT	Q58F21	947 aa	Predicted RBP	13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ANKRD22	Q5VYY1	191 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	RHPN2	Q8IUC4	686 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	SP8	Q8IXZ3	490 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ATL2	Q8NHH9	583 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	CD101	Q93033	1021 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	AGTPBP1	Q9UPW5	1226 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	ADGRA3	Q8IWK6	1321 aa		13.24	□□□□□ -0.29
DDR1-238	ENST00000446312	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	GRAP2	O75791	330 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	BAG2	O95816	211 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	NLRP11	P59045	1033 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	STRN3	Q13033	797 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	DSTYK	Q6XUX3	929 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	MCOLN2	Q8IZK6	566 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	FAM13C	Q8NE31	585 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	MAML1	Q92585	1016 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	KIFAP3	Q92845	792 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	CENPT	Q96BT3	561 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	CLPTM1L	Q96KA5	538 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	MXRA8	Q9BRK3	442 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	RXFP1	Q9HBX9	757 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	NXF1	Q9UBU9	619 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	GGA2	Q9UJY4	613 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	CHMP2B	Q9UQN3	213 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	ADAMTSL1	Q8N6G6	1762 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	FDX1	P10109	184 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	CIITA	P33076	1130 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	DMP1	Q13316	513 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	MAPK6	Q16659	721 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	SEPT12	Q8IYM1	358 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	ZNF516	Q92618	1163 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	MECR	Q9BV79	373 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	SLC13A1	Q9BZW2	595 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	IQCG	Q9H095	443 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	PACSIN3	Q9UKS6	424 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	TBX20	Q9UMR3	447 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	NR2E3	Q9Y5X4	410 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	PTPRJ	Q12913	1337 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	BTAF1	O14981	1849 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	SBF2	Q86WG5	1849 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	COL24A1	Q17RW2	1714 aa		13.23	□□□□□ -0.29
DDR1-238	ENST00000446312	TCRBV7S3A2	A0A539	114 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	DPPA5	A6NC42	116 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	KRT36	O76013	467 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	TOP3B	O95985	862 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	CCNE2	O96020	404 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	HLA-DRA	P01903	254 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	P4HB	P07237	508 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	UBTFL6	P0CB48	400 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	MRPS9	P82933	396 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	SHC3	Q92529	594 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	RBM41	Q96IZ5	413 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	TRAIP	Q9BWF2	469 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	ACSS2	Q9NR19	701 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	DLGAP2	Q9P1A6	1054 aa		13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	CNOT7	Q9UIV1	285 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-238	ENST00000446312	ZFP69B	Q9UJL9	534 aa		13.22	□□□□□ -0.29

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