RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 MRGBPQ9NV56 204 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 PSD3Q9NYI0 1048 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 TBX20Q9UMR3 447 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 AMHP03971 560 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 PTPAQ15257 358 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 JMJD4Q9H9V9 463 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
FN1-211ENST00000443816 PCDHB2Q9Y5E7 798 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.53
FN1-211ENST00000443816 KRT16P08779 473 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 PPP3CCP48454 512 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 LMBRD2Q68DH5 695 aaPredicted RBP11.77□□□□□ -0.53
FN1-211ENST00000443816 CHSY1Q86X52 802 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 NT5DC4Q86YG4 428 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 NUDCD3Q8IVD9 361 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 CXorf38Q8TB03 319 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 KLHL29Q96CT2 875 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 LATS2Q9NRM7 1088 aa11.77□□□□□ -0.53
FN1-211ENST00000443816 PPARGC1AQ9UBK2 798 aaKnown RBP11.77□□□□□ -0.53
FN1-211ENST00000443816 TNS2Q63HR2 1409 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 KDELC2Q7Z4H8 507 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 FBXO32Q969P5 355 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 ARHGEF38Q9NXL2 777 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 CAPN11Q9UMQ6 739 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 PLAAQ9Y263 795 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 F5H5T6 163 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 KITP10721 976 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 LHX1P48742 406 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 PMS2P54278 862 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 RBBP8NLQ8NC74 664 aaPredicted RBP11.76□□□□□ -0.53
FN1-211ENST00000443816 ATL2Q8NHH9 583 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 CPA5Q8WXQ8 436 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 SKA1Q96BD8 255 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 AGAP3Q96P47 875 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 SLIT1O75093 1534 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 PDHXO00330 501 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 P4HA2O15460 535 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 ITGB3P05106 788 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 PDXDC1Q6P996 788 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 VWDEQ8N2E2 1590 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 ANO9A1A5B4 782 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 C5orf58C9J3I9 102 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 RGL2O15211 777 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 MSCO60682 206 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
FN1-211ENST00000443816 ASS1P00966 412 aaKnown RBP11.76□□□□□ -0.53
FN1-211ENST00000443816 ATP1A3P13637 1013 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 EXOSC10Q01780 885 aaKnown RBP11.76□□□□□ -0.53
FN1-211ENST00000443816 GMCL1P1Q8NEA9 526 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 RUBCNQ92622 972 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 CYP2C8P10632 490 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 EDRF1Q3B7T1 1238 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 NUGGCQ68CJ6 796 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 ZBED8Q8IZ13 594 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 SPATC1LQ9H0A9 340 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 POLLQ9UGP5 575 aa11.76□□□□□ -0.53
FN1-211ENST00000443816 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
FN1-211ENST00000443816 GYG2O15488 501 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 CKBP12277 381 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 ELAVL2Q12926 359 aaKnown RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 PCSK7Q16549 785 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 NMRK1Q9NWW6 199 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 SNX24Q9Y343 169 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 A0A0G2JND7 137 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 KCNA2P16389 499 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 MTFR1Q15390 333 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 CPA4Q9UI42 421 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 C2orf81A6NN90 581 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 PQBP1O60828 265 aaKnown RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 VCAM1P19320 739 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 GPD1P21695 349 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 MMS22LQ6ZRQ5 1243 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 NAF1Q96HR8 494 aaKnown RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 GMCL1Q96IK5 515 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 ING2Q9H160 280 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 SPACA6W5XKT8 324 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 TARSL2A2RTX5 802 aaKnown RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 NCKAP1LP55160 1127 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 PTK6Q13882 451 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 BTBD6Q96KE9 485 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 SPATA31D1Q6ZQQ2 1576 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 TRPA1O75762 1119 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 HLA-DRAP01903 254 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 SRGNP10124 158 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 ETFBP38117 255 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 TTLL9Q3SXZ7 439 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 PCNX4Q63HM2 1172 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 SLC30A5Q8TAD4 765 aa11.75□□□□□ -0.53
FN1-211ENST00000443816 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
FN1-211ENST00000443816 RSAD1Q9HA92 442 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms