RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 OAZ2O95190 189 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 CYP11A1P05108 521 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 OR4Q2P0C623 313 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 CPB1P15086 417 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 WSCD1Q658N2 575 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 ANKRD40Q6AI12 368 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 GPT2Q8TD30 523 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 SUSD6Q92537 303 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 NUP62CLQ9H1M0 184 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 ADAM7Q9H2U9 754 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 FAM50BQ9Y247 325 aa19.42■□□□□ 0.7
CPSF4-205ENST00000440514 DENND4AQ7Z401 1863 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 MAPK13O15264 365 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 TRIM49P0CI25 452 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 TRIM49CP0CI26 452 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 CCNE1P24864 410 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 PSMC2P35998 433 aaKnown RBP19.41■□□□□ 0.7
CPSF4-205ENST00000440514 ITIH3Q06033 890 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 BIRC3Q13489 604 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 CBX2Q14781 532 aaPredicted RBP19.41■□□□□ 0.7
CPSF4-205ENST00000440514 C1orf220Q5T0J3 134 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 LIN9Q5TKA1 542 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 TDRD10Q5VZ19 366 aaKnown RBP19.41■□□□□ 0.7
CPSF4-205ENST00000440514 ELMSAN1Q6PJG2 1045 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 TMC2Q8TDI7 906 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 HPDLQ96IR7 371 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 TMEM209Q96SK2 561 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 UHRF1Q96T88 793 aaPredicted RBP19.41■□□□□ 0.7
CPSF4-205ENST00000440514 COL25A1Q9BXS0 654 aaPredicted RBP19.41■□□□□ 0.7
CPSF4-205ENST00000440514 PLEKHA4Q9H4M7 779 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 L1RE1Q9UN81 338 aa19.41■□□□□ 0.7
CPSF4-205ENST00000440514 R3HCC1Q9Y3T6 440 aaKnown RBP19.41■□□□□ 0.7
CPSF4-205ENST00000440514 ARHGEF37A1IGU5 675 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 CETN3O15182 167 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 C1RP00736 705 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 CST3P01034 146 aaPredicted RBP19.4■□□□□ 0.7
CPSF4-205ENST00000440514 C8AP07357 584 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 VAMP7P51809 220 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 CLDN10P78369 228 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 LRRC63Q05C16 580 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 MYO1EQ12965 1108 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 CES5AQ6NT32 575 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 METTL23Q86XA0 190 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 ZC3H3Q8IXZ2 948 aaKnown RBP19.4■□□□□ 0.7
CPSF4-205ENST00000440514 TRIML1Q8N9V2 468 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 OR10T2Q8NGX3 314 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 SLC7A14Q8TBB6 771 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 HDAC7Q8WUI4 952 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 NELFBQ8WX92 580 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 ZNF707Q96C28 371 aaPredicted RBP19.4■□□□□ 0.7
CPSF4-205ENST00000440514 DHTKD1Q96HY7 919 aaPredicted RBP19.4■□□□□ 0.7
CPSF4-205ENST00000440514 RTP3Q9BQQ7 232 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 DPP7Q9UHL4 492 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 SNX9Q9Y5X1 595 aa19.4■□□□□ 0.7
CPSF4-205ENST00000440514 CCDC195A0A1B0GUA6 201 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 OR6C75A6NL08 312 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 PHACTR2O75167 634 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 ZMYND10O75800 440 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 ABLIM3O94929 683 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 KRT13P13646 458 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 PPP1R2P41236 205 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 MYL6P60660 151 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 INTS8Q75QN2 995 aaKnown RBP19.39■□□□□ 0.69
CPSF4-205ENST00000440514 GPR149Q86SP6 731 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 PDCL2Q8N4E4 241 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 CMASQ8NFW8 434 aaPredicted RBP19.39■□□□□ 0.69
CPSF4-205ENST00000440514 ELMO3Q96BJ8 720 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 DUSP9Q99956 384 aaKnown RBP19.39■□□□□ 0.69
CPSF4-205ENST00000440514 POMKQ9H5K3 350 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 DSEQ9UL01 958 aa19.39■□□□□ 0.69
CPSF4-205ENST00000440514 HUS1O60921 280 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 VNN1O95497 513 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 C4BPAP04003 597 aaKnown RBP19.38■□□□□ 0.69
CPSF4-205ENST00000440514 EPB41P11171 864 aaKnown RBP19.38■□□□□ 0.69
CPSF4-205ENST00000440514 CDR1P51861 262 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 AP3M2P53677 418 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 STX17P56962 302 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 ZP2Q05996 745 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 PPP3CAQ08209 521 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 PAK1Q13153 545 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 TRPC3Q13507 836 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 PPM1LQ5SGD2 360 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 TTI2Q6NXR4 508 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 RNF19BQ6ZMZ0 732 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 OSTM1Q86WC4 334 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 ZNF461Q8TAF7 563 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 SMG7Q92540 1137 aaKnown RBP19.38■□□□□ 0.69
CPSF4-205ENST00000440514 RIPOR3Q96MK2 946 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 PGLYRP2Q96PD5 576 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 MKNK1Q9BUB5 465 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 XYLT2Q9H1B5 865 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 MMRN2Q9H8L6 949 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 ZDHHC7Q9NXF8 308 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 GDAP2Q9NXN4 497 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 VCANP13611 3396 aa19.38■□□□□ 0.69
CPSF4-205ENST00000440514 SLC16A3O15427 465 aaKnown RBP19.37■□□□□ 0.69
CPSF4-205ENST00000440514 CCL16O15467 120 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 HCRTO43612 131 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 CLSTN1O94985 981 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 SEC24AO95486 1093 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms