RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 NRP1O14786 923 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 FAM163BP0C2L3 166 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 ODC1P11926 461 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 FERP16591 822 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 LAG3P18627 525 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 HNRNPH3P31942 346 aaKnown RBP22.15■■□□□ 1.14
CHD3-204ENST00000439235 USP8P40818 1118 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 SLC11A1P49279 550 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 SPOUT1Q5T280 376 aaKnown RBP22.15■■□□□ 1.14
CHD3-204ENST00000439235 UBR7Q8N806 425 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 APPL2Q8NEU8 664 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 RABGGTAQ92696 567 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 SENP8Q96LD8 212 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 RNPC3Q96LT9 517 aaKnown RBP22.15■■□□□ 1.14
CHD3-204ENST00000439235 CWH43Q9H720 699 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 CISHQ9NSE2 258 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 AIPL1Q9NZN9 384 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 PCDHB4Q9Y5E5 795 aa22.15■■□□□ 1.14
CHD3-204ENST00000439235 FNDC1Q4ZHG4 1894 aaPredicted RBP22.15■■□□□ 1.14
CHD3-204ENST00000439235 FOXN3O00409 490 aaPredicted RBP22.14■■□□□ 1.13
CHD3-204ENST00000439235 CYB561D2O14569 222 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 TRAPPC3O43617 180 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 TACC1O75410 805 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 GFPT2O94808 682 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 GALTP07902 379 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 WEE2P0C1S8 567 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 KRT5P13647 590 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 CD58P19256 250 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 ACO1P21399 889 aaKnown RBP22.14■■□□□ 1.13
CHD3-204ENST00000439235 RAP1GAPP47736 663 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 ALDH7A1P49419 539 aaKnown RBP22.14■■□□□ 1.13
CHD3-204ENST00000439235 BCAR1P56945 870 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 FAM71AQ8IYT1 594 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 CCDC112Q8NEF3 446 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 RAD9AQ99638 391 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 DNAI2Q9GZS0 605 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 HCSTQ9UBK5 93 aa22.14■■□□□ 1.13
CHD3-204ENST00000439235 TADA2AO75478 443 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 PNMA6AP0CW24 399 aaPredicted RBP22.13■■□□□ 1.13
CHD3-204ENST00000439235 INCA1Q0VD86 236 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 SOWAHAQ2M3V2 549 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 TIGD5Q53EQ6 642 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 LIMS2Q7Z4I7 341 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 ADGRF2Q8IZF7 708 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 TMEM86AQ8N2M4 240 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 FIBCD1Q8N539 461 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 RBBP8NLQ8NC74 664 aaPredicted RBP22.13■■□□□ 1.13
CHD3-204ENST00000439235 SPATA18Q8TC71 538 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 HASPINQ8TF76 798 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 SUSD3Q96L08 255 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 ZNF558Q96NG5 402 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 UBE2OQ9C0C9 1292 aaKnown RBP22.13■■□□□ 1.13
CHD3-204ENST00000439235 SDCBP2Q9H190 292 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 AAASQ9NRG9 546 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 ADAM28Q9UKQ2 775 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 DSEQ9UL01 958 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 CNTN6Q9UQ52 1028 aa22.13■■□□□ 1.13
CHD3-204ENST00000439235 MRPL42Q9Y6G3 142 aaKnown RBP22.13■■□□□ 1.13
CHD3-204ENST00000439235 SF3B1O75533 1304 aaKnown RBP eCLIP22.12■■□□□ 1.132e-6■■■■□ 26.7
CHD3-204ENST00000439235 M0QZQ0 153 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 TLL1O43897 1013 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 DEKP35659 375 aaKnown RBP22.12■■□□□ 1.13
CHD3-204ENST00000439235 BRCC3P46736 316 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 CDH8P55286 799 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 BPIFB4P59827 614 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 ARID5AQ03989 594 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 ELAVL2Q12926 359 aaKnown RBP22.12■■□□□ 1.13
CHD3-204ENST00000439235 MEA1Q16626 185 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 C9orf50Q5SZB4 431 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 TMEM270Q6UE05 265 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 CD300LGQ6UXG3 332 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 LRRC8AQ8IWT6 810 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 SNX25Q9H3E2 840 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 BARX2Q9UMQ3 279 aaPredicted RBP22.12■■□□□ 1.13
CHD3-204ENST00000439235 L1RE1Q9UN81 338 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 BZW2Q9Y6E2 419 aaKnown RBP22.12■■□□□ 1.13
CHD3-204ENST00000439235 PTPRSQ13332 1948 aa22.12■■□□□ 1.13
CHD3-204ENST00000439235 CILPO75339 1184 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 SERPING1P05155 500 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 ITGB1P05556 798 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 FECHP22830 423 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 WARSP23381 471 aaKnown RBP22.11■■□□□ 1.13
CHD3-204ENST00000439235 PRKCIP41743 596 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 CDK17Q00537 523 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 KLHL30Q0D2K2 578 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 TDRD12Q587J7 1177 aaKnown RBP22.11■■□□□ 1.13
CHD3-204ENST00000439235 E4F1Q66K89 784 aaPredicted RBP22.11■■□□□ 1.13
CHD3-204ENST00000439235 UNC93AQ86WB7 457 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 METTL23Q86XA0 190 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 PDCL2Q8N4E4 241 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 SP7Q8TDD2 431 aaPredicted RBP22.11■■□□□ 1.13
CHD3-204ENST00000439235 BAG1Q99933 345 aaPredicted RBP22.11■■□□□ 1.13
CHD3-204ENST00000439235 GDF15Q99988 308 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 MARCH5Q9NX47 278 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 PCDHB8Q9UN66 801 aa22.11■■□□□ 1.13
CHD3-204ENST00000439235 H0YGN5 161 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 CYP26A1O43174 497 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 TYMPP19971 482 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 IGFBP6P24592 240 aaPredicted RBP22.1■■□□□ 1.13
CHD3-204ENST00000439235 PDE6CP51160 858 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms