RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KLK14Q9P0G3 267 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 FAM187AA6NFU0 413 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 EIF3HO15372 352 aaKnown RBP eCLIP12.23□□□□□ -0.456e-7■■■□□ 15.4
TRAPPC9-202ENST00000438773 SHOX2O60902 331 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 RPAINQ86UA6 219 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 CYFIP2Q96F07 1278 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 C12orf42Q96LP6 360 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 OSMRQ99650 979 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 CCDC88AQ3V6T2 1871 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 TMEM88BA6NKF7 163 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 ADRB2P07550 413 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 KCNA3P22001 575 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 TAP1Q03518 808 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 ORC1Q13415 861 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 HSDL1Q3SXM5 330 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 KIAA1841Q6NSI8 718 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 CARD9Q9H257 536 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 GANQ9H2C0 597 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 ACKR2O00590 384 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 RASGRF2O14827 1237 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 RAD51CO43502 376 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 LGALS2P05162 132 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 FAM153BP0C7A2 387 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 KCNA2P16389 499 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 SEC24CP53992 1094 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 SPIRE1Q08AE8 756 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 ACVR2BQ13705 512 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 TRADDQ15628 312 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 FAM153CQ494X1 144 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZCWPW2Q504Y3 356 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 ABHD15Q6UXT9 468 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 TTC13Q8NBP0 860 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 TEPSINQ96N21 525 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 TRIM51Q9BSJ1 452 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 FAM153AQ9UHL3 310 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 LTBP3Q9NS15 1303 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 PDGFRAP16234 1089 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 PRLRP16471 622 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 RRM1P23921 792 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 CARSP49589 748 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 GRIK4Q16099 956 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 WDR49Q8IV35 697 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 WDR35Q9P2L0 1181 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZNF862O60290 1169 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 GRAP2O75791 330 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 KCNJ1P48048 391 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 CDH6P55285 790 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 DHX34Q14147 1143 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 PSMD6Q15008 389 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 PHLDB3Q6NSJ2 640 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 PDIK1LQ8N165 341 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 MMGT1Q8N4V1 131 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 UBA3Q8TBC4 463 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZIM3Q96PE6 472 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 ADAM33Q9BZ11 813 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 CISHQ9NSE2 258 aa12.22□□□□□ -0.45
TRAPPC9-202ENST00000438773 MYH10P35580 1976 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 ANKRD36CQ5JPF3 1778 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 FGFR4P22455 802 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 INHBEP58166 350 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 SCN4BQ8IWT1 228 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 PPME1Q9Y570 386 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZNF536O15090 1300 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 OPLAHO14841 1288 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 EIF3BP55884 814 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 PLCB4Q15147 1175 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 CYP4A22Q5TCH4 519 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 OR2W6PQ8NHA6 318 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 RNF139Q8WU17 664 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 NCAPGQ9BPX3 1015 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 TINF2Q9BSI4 451 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 TLR10Q9BXR5 811 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 CELF4Q9BZC1 486 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 ACP6Q9NPH0 428 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 INTS9Q9NV88 658 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 DPP3Q9NY33 737 aa12.21□□□□□ -0.45
TRAPPC9-202ENST00000438773 C17orf102A2RUQ5 167 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 FARP2O94887 1054 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 CD4P01730 458 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 LCP1P13796 627 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 HNRNPH3P31942 346 aaKnown RBP12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 HNRNPH1P31943 449 aaKnown RBP12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 MARSP56192 900 aaKnown RBP12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 SNCBQ16143 134 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 BRSK2Q8IWQ3 736 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 KIRREL3Q8IZU9 778 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 GDAP1Q8TB36 358 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 FEZF2Q8TBJ5 459 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 TRIM7Q9C029 511 aa12.21□□□□□ -0.46
TRAPPC9-202ENST00000438773 TOMM70O94826 608 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 GLI1P08151 1106 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 GCNT1Q02742 428 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 CAPSQ13938 189 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 THEM5Q8N1Q8 247 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 ELAC2Q9BQ52 826 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms