RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 ZCWPW2Q504Y3 356 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 LIN9Q5TKA1 542 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 TPGS2Q68CL5 300 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 RSPO2Q6UXX9 243 aaPredicted RBP17.63■□□□□ 0.41
CTSD-205ENST00000438213 TMC5Q6UXY8 1006 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 CCDC149Q6ZUS6 474 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 INTS8Q75QN2 995 aaKnown RBP17.63■□□□□ 0.41
CTSD-205ENST00000438213 TRIML1Q8N9V2 468 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 CXorf38Q8TB03 319 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 SUSD6Q92537 303 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 BORCS6Q96GS4 357 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 HPDLQ96IR7 371 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 UHRF1Q96T88 793 aaPredicted RBP17.63■□□□□ 0.41
CTSD-205ENST00000438213 ZDHHC7Q9NXF8 308 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 GDAP2Q9NXN4 497 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 SIX4Q9UIU6 781 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 FBXW11Q9UKB1 542 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 MAFFQ9ULX9 164 aa17.63■□□□□ 0.41
CTSD-205ENST00000438213 CCDC195A0A1B0GUA6 201 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 BIN1O00499 593 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 ZMYND10O75800 440 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 ABLIM3O94929 683 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 CCNE1P24864 410 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 CLDN10P78369 228 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 FKBP3Q00688 224 aaKnown RBP17.62■□□□□ 0.41
CTSD-205ENST00000438213 ROR1Q01973 937 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 C15orf39Q6ZRI6 1047 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 GPR149Q86SP6 731 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 ZNF516Q92618 1163 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 MKNK1Q9BUB5 465 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 RHOBTB2Q9BYZ6 727 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 CLSTN2Q9H4D0 955 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 PTPRJQ12913 1337 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 VWA8A3KMH1 1905 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 A0A0C4DFX4 3053 aa17.62■□□□□ 0.41
CTSD-205ENST00000438213 TCF20Q9UGU0 1960 aaKnown RBP17.61■□□□□ 0.41
CTSD-205ENST00000438213 LRRIQ3A6PVS8 624 aaPredicted RBP17.61■□□□□ 0.41
CTSD-205ENST00000438213 AKAP3O75969 853 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 HNRNPA1P09651 372 aaKnown RBP eCLIP17.61■□□□□ 0.41
CTSD-205ENST00000438213 CPB1P15086 417 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 ATICP31939 592 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 VAMP7P51809 220 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 ENPEPQ07075 957 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 BIRC3Q13489 604 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 PPM1LQ5SGD2 360 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 WSCD1Q658N2 575 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 ANKRD40Q6AI12 368 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 DPH6Q7L8W6 267 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 ADHFE1Q8IWW8 467 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 TMEM86AQ8N2M4 240 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 FAM84AQ96KN4 292 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 PHF7Q9BWX1 381 aaPredicted RBP17.61■□□□□ 0.41
CTSD-205ENST00000438213 PRKD2Q9BZL6 878 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 PIDD1Q9HB75 910 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 SNX9Q9Y5X1 595 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 NCOR1O75376 2440 aa17.61■□□□□ 0.41
CTSD-205ENST00000438213 SCN1AP35498 2009 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 BICDL2A1A5D9 508 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 RFPL2O75678 378 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 CST3P01034 146 aaPredicted RBP17.6■□□□□ 0.41
CTSD-205ENST00000438213 C8AP07357 584 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 EPB41P11171 864 aaKnown RBP17.6■□□□□ 0.41
CTSD-205ENST00000438213 ATF2P15336 505 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 TOP6BLQ8N6T0 577 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 SPATA18Q8TC71 538 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 PLEKHO2Q8TD55 490 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
CTSD-205ENST00000438213 COL25A1Q9BXS0 654 aaPredicted RBP17.6■□□□□ 0.41
CTSD-205ENST00000438213 GZF1Q9H116 711 aaPredicted RBP17.6■□□□□ 0.41
CTSD-205ENST00000438213 AFF4Q9UHB7 1163 aaKnown RBP17.6■□□□□ 0.41
CTSD-205ENST00000438213 UNC80Q8N2C7 3258 aa17.6■□□□□ 0.41
CTSD-205ENST00000438213 WDR27A2RRH5 827 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 PPP1R3GB7ZBB8 358 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 PRRG1O14668 218 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 XYLBO75191 536 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 C4BPAP04003 597 aaKnown RBP17.59■□□□□ 0.41
CTSD-205ENST00000438213 BMP6P22004 513 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 HOXA9P31269 272 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 LHX1P48742 406 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 GPR17Q13304 367 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 KLHL10Q6JEL2 608 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 TCEAL8Q8IYN2 117 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 SMG7Q92540 1137 aaKnown RBP17.59■□□□□ 0.41
CTSD-205ENST00000438213 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 CYP4F11Q9HBI6 524 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 TTC28Q96AY4 2481 aa17.59■□□□□ 0.41
CTSD-205ENST00000438213 DLL1O00548 723 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 SLC16A3O15427 465 aaKnown RBP17.58■□□□□ 0.4
CTSD-205ENST00000438213 STX10O60499 249 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 PAPLNO95428 1278 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 STAU1O95793 577 aaKnown RBP17.58■□□□□ 0.4
CTSD-205ENST00000438213 WEE2P0C1S8 567 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 FAM163BP0C2L3 166 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 CD44P16070 742 aaKnown RBP17.58■□□□□ 0.4
CTSD-205ENST00000438213 SSTR3P32745 418 aaPredicted RBP17.58■□□□□ 0.4
CTSD-205ENST00000438213 DLG4P78352 724 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 MYL7Q01449 175 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 ADCY1Q08828 1119 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 SMARCB1Q12824 385 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms