RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 FOXQ1Q9C009 403 aa10.25□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MAFFQ9ULX9 164 aa10.25□□□□□ -0.77
CDC42-IT1-201ENST00000431803 TBX20Q9UMR3 447 aa10.25□□□□□ -0.77
CDC42-IT1-201ENST00000431803 FCF1Q9Y324 198 aaKnown RBP10.25□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SIT1Q9Y3P8 196 aa10.25□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.25□□□□□ -0.77
CDC42-IT1-201ENST00000431803 INSL5Q9Y5Q6 135 aa10.25□□□□□ -0.77
CDC42-IT1-201ENST00000431803 A0A0B4J269 797 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 NRG2O14511 850 aaPredicted RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 HNRNPDLO14979 420 aaKnown RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ECI2O75521 394 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MICAL2O94851 1124 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 OAZ2O95190 189 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 DCNP07585 359 aaKnown RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PTPN2P17706 415 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PLCG1P19174 1290 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CYP3A5P20815 502 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 FCARP24071 287 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ELF1P32519 619 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 LONP1P36776 959 aaKnown RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 TNFSF9P41273 254 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CCR2P41597 374 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 LIG4P49917 911 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ARPP19P56211 112 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PFKPQ01813 784 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PRKCQQ04759 706 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SPAG1Q07617 926 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 LAPTM4AQ15012 233 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MLF2Q15773 248 aaPredicted RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 KYAT1Q16773 422 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ZBTB41Q5SVQ8 909 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SLC39A4Q6P5W5 647 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 BEST2Q8NFU1 509 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 RAD54LQ92698 747 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 BICD1Q96G01 975 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PARVGQ9HBI0 331 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CYP4F11Q9HBI6 524 aa10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 AFF4Q9UHB7 1163 aaKnown RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 UBQLN1Q9UMX0 589 aaKnown RBP10.24□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CACNA1AO00555 2505 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 KANSL1LA0AUZ9 987 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 LACTBL1A8MY62 500 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 K7ENM7 598 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 OGTO15294 1046 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 TRAK2O60296 914 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 FAM13AO94988 1023 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 VNN2O95498 520 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ABCD1P33897 745 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 EPHA5P54756 1037 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 YWHAHQ04917 246 aaPredicted RBP10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PPP2R3AQ06190 1150 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ADCY1Q08828 1119 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CUL4AQ13619 759 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MCM6Q14566 821 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 KARSQ15046 597 aaKnown RBP10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SF3A1Q15459 793 aaKnown RBP10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SLC44A4Q53GD3 710 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SPECC1Q5M775 1068 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 Q6ZNB5 142 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MAP4K3Q8IVH8 894 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 C1orf210Q8IVY1 113 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MYCT1Q8N699 235 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ELSPBP1Q96BH3 223 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 TCEAL4Q96EI5 215 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MCRS1Q96EZ8 462 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 USB1Q9BQ65 265 aaKnown RBP10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CORO1BQ9BR76 489 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 OXCT2Q9BYC2 517 aaPredicted RBP10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CCSER1Q9C0I3 900 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CEP72Q9P209 647 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 OTOGLQ3ZCN5 2332 aa10.23□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CACNA1IQ9P0X4 2223 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 DNAH14Q0VDD8 3507 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SHISA7A6NL88 538 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ZNF197O14709 1029 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PPEF2O14830 753 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 XPOTO43592 962 aaKnown RBP10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 LRRN2O75325 713 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MOSPD3O75425 235 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 CPB1P15086 417 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MARCKSP29966 332 aaPredicted RBP10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 GUCY2FP51841 1108 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 GTF2BQ00403 316 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 TWF1Q12792 350 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 DHX8Q14562 1220 aaKnown RBP10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PTPAQ15257 358 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 FAM78AQ5JUQ0 283 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 SPATA1Q5VX52 437 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 TANGO2Q6ICL3 276 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PDZD4Q76G19 769 aaPredicted RBP10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MAML2Q8IZL2 1156 aaPredicted RBP10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 LEMD2Q8NC56 503 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 LARP4BQ92615 738 aaKnown RBP10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 ASB16Q96NS5 453 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 MSTO1Q9BUK6 570 aa10.22□□□□□ -0.77
CDC42-IT1-201ENST00000431803 PLA2G2FQ9BZM2 168 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms