RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SVOPQ8N4V2 548 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 MPP4Q96JB8 637 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 S100A13Q99584 98 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 H3BMM5 538 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 HPGDP15428 266 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 PTPN1P18031 435 aaKnown RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 PTRHD1Q6GMV3 140 aaKnown RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 MZT2BQ6NZ67 158 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 SYTL1Q8IYJ3 562 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 VPS33AQ96AX1 596 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 ECE2O60344 883 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 STX11O75558 287 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 KRT34O76011 436 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 LRRC71Q8N4P6 559 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 CAPSLQ8WWF8 208 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 PAGE5Q96GU1 130 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 BTBD3Q9Y2F9 522 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 IDH3BO43837 385 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 RALAP11233 206 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 MYL12AP19105 171 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 PEX5P50542 639 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 ARF3P61204 181 aaPredicted RBP17.16■□□□□ 0.34
RIF1-204ENST00000430328 ARF1P84077 181 aaKnown RBP17.16■□□□□ 0.34
RIF1-204ENST00000430328 FUT11Q495W5 492 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 CACHD1Q5VU97 1274 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 C1orf54Q8WWF1 131 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 SPACA6W5XKT8 324 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 RIMS2Q9UQ26 1411 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 EIF2AK4Q9P2K8 1649 aaKnown RBP17.16■□□□□ 0.34
RIF1-204ENST00000430328 EFCAB10A6NFE3 127 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 TPST1O60507 370 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 CCDC157Q569K6 752 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 SLC40A1Q9NP59 571 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 KLHL1Q9NR64 748 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 GRID1Q9ULK0 1009 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 COQ6Q9Y2Z9 468 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 SPICE1Q8N0Z3 855 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 M0QYV0 167 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 PSMD12O00232 456 aaPredicted RBP17.16■□□□□ 0.34
RIF1-204ENST00000430328 ARMC6Q6NXE6 501 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 GPD1LQ8N335 351 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 RIBC1Q8N443 379 aaPredicted RBP17.16■□□□□ 0.34
RIF1-204ENST00000430328 CCDC162PA2VCL2 907 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 DYRK3O43781 588 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 GPC3P51654 580 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 POU4F1Q01851 419 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 KDELC2Q7Z4H8 507 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 B3GALT6Q96L58 329 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 CHP2O43745 196 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 CLTBP09497 229 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 FCGR1AP12314 374 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 CTSWP56202 376 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 TPI1P60174 286 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 MAPK6Q16659 721 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 CATSPER4Q7RTX7 472 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 HS6ST3Q8IZP7 471 aa17.16■□□□□ 0.34
RIF1-204ENST00000430328 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
RIF1-204ENST00000430328 MMP1P03956 469 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 RBBP4Q09028 425 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 LPIN1Q14693 890 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 NAIF1Q69YI7 327 aaPredicted RBP17.15■□□□□ 0.34
RIF1-204ENST00000430328 DDX53Q86TM3 631 aaKnown RBP17.15■□□□□ 0.34
RIF1-204ENST00000430328 ATG16L2Q8NAA4 619 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 WDR60Q8WVS4 1066 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.15■□□□□ 0.34
RIF1-204ENST00000430328 ZFYVE9O95405 1425 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 GUCY1A2P33402 732 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 SPRP35270 261 aaPredicted RBP17.15■□□□□ 0.34
RIF1-204ENST00000430328 DGUOKQ16854 277 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 FAM172AQ8WUF8 416 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 TRIM66O15016 1216 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 H2AFYO75367 372 aaKnown RBP17.15■□□□□ 0.34
RIF1-204ENST00000430328 NOS3P29474 1203 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 ROGDIQ9GZN7 287 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 BABAM1Q9NWV8 329 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 PHF20L1A8MW92 1017 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 AHCYL1O43865 530 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 PSMB9P28065 219 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 SYCP2LQ5T4T6 812 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 C11orf70Q9BRQ4 267 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 MANSC1Q9H8J5 431 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 SH3BP4Q9P0V3 963 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 EIF3LQ9Y262 564 aaKnown RBP17.15■□□□□ 0.34
RIF1-204ENST00000430328 LGALS16A8MUM7 142 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 AGAP3Q96P47 875 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 PNMA6EA0A0J9YXQ4 647 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 TRAF3Q13114 568 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 MFSD4BQ5TF39 518 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 OLFML2AQ68BL7 652 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 POMGNT2Q8NAT1 580 aa17.15■□□□□ 0.34
RIF1-204ENST00000430328 RMND5AQ9H871 391 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms