RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 HLA-DRAP01903 254 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 CYP2C19P33261 490 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 MRPL1Q9BYD6 325 aaKnown RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 RHOBTB1O94844 696 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 GTF2H1P32780 548 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 TBL3Q12788 808 aaKnown RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 WDR35Q9P2L0 1181 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 SETD1BQ9UPS6 1966 aaKnown RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 MAGEB2O15479 319 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 PIGHQ14442 188 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 SPATA21Q7Z572 469 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 KLF6Q99612 283 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 GIMAP4Q9NUV9 329 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 CHORDC1Q9UHD1 332 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 IL18RAPO95256 599 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 KRT8P05787 483 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 THPOP40225 353 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 ZNF200P98182 395 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 CDH18Q13634 790 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 PDIA5Q14554 519 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 ADCK1Q86TW2 530 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 HORMAD1Q86X24 394 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 CINPQ9BW66 212 aaPredicted RBP16.1■□□□□ 0.17
PTPRF-206ENST00000429895 CDYLQ9Y232 598 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 KIF1BO60333 1816 aa16.1■□□□□ 0.17
PTPRF-206ENST00000429895 AIM2O14862 343 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 PLA2G4AP47712 749 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 GLRA4Q5JXX5 417 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 TDRD10Q5VZ19 366 aaKnown RBP16.09■□□□□ 0.17
PTPRF-206ENST00000429895 LAYNQ6UX15 382 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 OOSP2Q86WS3 158 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 SPATA4Q8NEY3 305 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 MOV10L1Q9BXT6 1211 aaKnown RBP16.09■□□□□ 0.17
PTPRF-206ENST00000429895 PTK7Q13308 1070 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 SAMD7Q7Z3H4 446 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 C10orf53Q8N6V4 93 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 SPASTQ9UBP0 616 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 CRLS1Q9UJA2 301 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 PNPLA7Q6ZV29 1317 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 GPD1P21695 349 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 RGS4P49798 205 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 MRPL28Q13084 256 aaKnown RBP16.09■□□□□ 0.17
PTPRF-206ENST00000429895 PARP9Q8IXQ6 854 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 MAGEB10Q96LZ2 347 aaPredicted RBP16.09■□□□□ 0.17
PTPRF-206ENST00000429895 NUDT12Q9BQG2 462 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 TRIM9Q9C026 710 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 PKD2L2Q9NZM6 624 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 EHD2Q9NZN4 543 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 LZTS1Q9Y250 596 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 A0A1W2PQC6 194 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 CCDC159P0C7I6 412 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 ORC1Q13415 861 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 ARHGAP18Q8N392 663 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 DPF2Q92785 391 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 SLC25A13Q9UJS0 675 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 FHOD1Q9Y613 1164 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 TRIM16O95361 564 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 PCSK1P29120 753 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 AVPR1AP37288 418 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 RFC5P40937 340 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 ALDH7A1P49419 539 aaKnown RBP16.09■□□□□ 0.17
PTPRF-206ENST00000429895 CPT1AP50416 773 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 SLC16A1P53985 500 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 CNGA3Q16281 694 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
PTPRF-206ENST00000429895 MAP3K4Q9Y6R4 1608 aa16.09■□□□□ 0.17
PTPRF-206ENST00000429895 HEATR9A2RTY3 570 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 UBXN8O00124 270 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 TCF3P15923 654 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 PBLDP30039 288 aaPredicted RBP16.08■□□□□ 0.17
PTPRF-206ENST00000429895 SEZ6Q53EL9 994 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 CHP1Q99653 195 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 ZNF189O75820 626 aaPredicted RBP16.08■□□□□ 0.17
PTPRF-206ENST00000429895 YY1P25490 414 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 KCNB1Q14721 858 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 PLD3Q8IV08 490 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 SPATA18Q8TC71 538 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 SCFD2Q8WU76 684 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 SLC24A3Q9HC58 644 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 MYOZ2Q9NPC6 264 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 SMARCAL1Q9NZC9 954 aa16.08■□□□□ 0.17
PTPRF-206ENST00000429895 C17orf102A2RUQ5 167 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 CFAP99D6REC4 459 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 ITGB3P05106 788 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 CETPP11597 493 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 CHN1P15882 459 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 UGP2Q16851 508 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 PRR5LQ6MZQ0 368 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 LONP2Q86WA8 852 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 JADE3Q92613 823 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 FAM47DPA6NHR8 397 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 PNKPQ96T60 521 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 ENTPD7Q9NQZ7 604 aa16.08■□□□□ 0.16
PTPRF-206ENST00000429895 ERAP1Q9NZ08 941 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms