RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC1-202ENST00000428704 PAXBP1Q9Y5B6 917 aa9.45□□□□□ -0.9
HDAC1-202ENST00000428704 COL4A3BPQ9Y5P4 624 aa9.45□□□□□ -0.9
HDAC1-202ENST00000428704 INPPL1O15357 1258 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 ZC3H11AO75152 810 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 KCNK5O95279 499 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 CASP1P29466 404 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 CDC25AP30304 524 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 DNM2P50570 870 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 LIMK1P53667 647 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 LAMTOR4Q0VGL1 99 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 FOXC1Q12948 553 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 PAK1Q13153 545 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 SIM2Q14190 667 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 PPP2R5DQ14738 602 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 FILIP1LQ4L180 1135 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 CLLU1OSQ5K130 101 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 RSPO2Q6UXX9 243 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 CYP26C1Q6V0L0 522 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 OTUD6AQ7L8S5 288 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 DDX53Q86TM3 631 aaKnown RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 TMEM173Q86WV6 379 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 ECHDC2Q86YB7 292 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 CCAR2Q8N163 923 aaKnown RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 MYRIPQ8NFW9 859 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 ASAP3Q8TDY4 903 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 PSPC1Q8WXF1 523 aaKnown RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 SMG7Q92540 1137 aaKnown RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 KLHL5Q96PQ7 755 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 POLR3CQ9BUI4 534 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 MRPL9Q9BYD2 267 aaKnown RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 GCOM2Q9BZD3 368 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-202ENST00000428704 BLZF1Q9H2G9 400 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 PIDD1Q9HB75 910 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 TUFT1Q9NNX1 390 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 MAN1C1Q9NR34 630 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 LRWD1Q9UFC0 647 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 ITIH6Q6UXX5 1313 aa9.44□□□□□ -0.9
HDAC1-202ENST00000428704 SMG1Q96Q15 3661 aaKnown RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 PP2D1A8MPX8 630 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 DYNC1I1O14576 645 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 TM4SF5O14894 197 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 GAS2O43903 313 aaKnown RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 STX10O60499 249 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 SSBP05455 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 MYBP10242 640 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 PLCG1P19174 1290 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 SPINK2P20155 84 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 RPA1P27694 616 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 PRCPP42785 496 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 RPS9P46781 194 aaKnown RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 CDC42EP1Q00587 391 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 PFKPQ01813 784 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 MTAPQ13126 283 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 PSMD2Q13200 908 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 STIM1Q13586 685 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 CAPSQ13938 189 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 ECM1Q16610 540 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 TMEM119Q4V9L6 283 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 E4F1Q66K89 784 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 SV2BQ7L1I2 683 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 C17orf53Q8N3J3 647 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 HELQQ8TDG4 1101 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 CLDN23Q96B33 292 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 IGSF21Q96ID5 467 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 PNMA5Q96PV4 448 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 NELL2Q99435 816 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 TRAIPQ9BWF2 469 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 THAP9Q9H5L6 903 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 BLOC1S4Q9NUP1 217 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 AGPAT5Q9NUQ2 364 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 DPP7Q9UHL4 492 aa9.43□□□□□ -0.9
HDAC1-202ENST00000428704 TDRD15B5MCY1 1934 aaKnown RBP9.43□□□□□ -0.9
HDAC1-202ENST00000428704 A0A0U1RQF3 1178 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 BICDL2A1A5D9 508 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 CARNS1A5YM72 827 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 MEIS3P2A8K0S8 358 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 PSMA7O14818 248 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 ARHGAP6O43182 974 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 USO1O60763 962 aaKnown RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 DGAT1O75907 488 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 CNPP09543 421 aaKnown RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 SRGAP2CP0DJJ0 459 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 TNNT1P13805 278 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 GLRA2P23416 452 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 CCNE1P24864 410 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 EEF1GP26641 437 aaKnown RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 ARL2P36404 184 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 PHKA2P46019 1235 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 TPD52L1Q16890 204 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 MSS51Q4VC12 460 aa9.42□□□□□ -0.9
HDAC1-202ENST00000428704 SOWAHCQ53LP3 525 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-202ENST00000428704 UBXN11Q5T124 520 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms