RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 HES2Q9Y543 173 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 BRCA2P51587 3418 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 PLXNA1Q9UIW2 1896 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 NRCAMQ92823 1304 aa11.07□□□□□ -0.64
HDAC9-210ENST00000428307 F2P00734 622 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 MYL3P08590 195 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 CYP2C9P11712 490 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 MMP8P22894 467 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 HOXA11P31270 313 aaPredicted RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 DR1Q01658 176 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 TMEM132DQ14C87 1099 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 RUFY4Q6ZNE9 571 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 DPH6Q7L8W6 267 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 CATSPER4Q7RTX7 472 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 ZNF410Q86VK4 478 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 WDTC1Q8N5D0 677 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 DNAJB3Q8WWF6 145 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 CAVIN3Q969G5 261 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 MAGOHBQ96A72 148 aaKnown RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 SDCBP2Q9H190 292 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 NEUROG2Q9H2A3 272 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 ADAMTS10Q9H324 1103 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 MRPL47Q9HD33 250 aaKnown RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 UTP11Q9Y3A2 253 aaKnown RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 DOCK3Q8IZD9 2030 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 TNPO2O14787 897 aaKnown RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 TREHO43280 583 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 GPR32O75388 356 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 NPTXRO95502 500 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 CTNNA2P26232 953 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 GJC1P36383 396 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 MFSD10Q14728 455 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 PLEKHA7Q6IQ23 1121 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 SLC13A5Q86YT5 568 aaPredicted RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 TMEM35BQ8NCS4 154 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 CXorf38Q8TB03 319 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 HPDLQ96IR7 371 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 VCPIP1Q96JH7 1222 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 TWNKQ96RR1 684 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 GCOM2Q9BZD3 368 aaPredicted RBP11.06□□□□□ -0.64
HDAC9-210ENST00000428307 MED4Q9NPJ6 270 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 SNTG2Q9NY99 539 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 HMGXB4Q9UGU5 601 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 ADAM21Q9UKJ8 722 aa11.06□□□□□ -0.64
HDAC9-210ENST00000428307 RNF40O75150 1001 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 PROSCO94903 275 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 RARAP10276 462 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 ECHS1P30084 290 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 KCNJ1P48048 391 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 AARSP49588 968 aaKnown RBP eCLIP11.05□□□□□ -0.64
HDAC9-210ENST00000428307 CUL1Q13616 776 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 CYP4A22Q5TCH4 519 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 DENND1BQ6P3S1 775 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 ERICH1Q86X53 443 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 ZIC5Q96T25 663 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 EIF2AQ9BY44 585 aaKnown RBP11.05□□□□□ -0.64
HDAC9-210ENST00000428307 AP5M1Q9H0R1 490 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 DPP3Q9NY33 737 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 GJD2Q9UKL4 321 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 FLT3P36888 993 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 SLC1A1P43005 524 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 RAD23BP54727 409 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 CRHR2Q13324 411 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 CLUL1Q15846 466 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 TTC27Q6P3X3 843 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 CCDC137Q6PK04 289 aaKnown RBP11.05□□□□□ -0.64
HDAC9-210ENST00000428307 FEZF2Q8TBJ5 459 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 FAM71BQ8TC56 605 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 USP6NLQ92738 828 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 MCEEQ96PE7 176 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 APOL6Q9BWW8 343 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 HEMGNQ9BXL5 484 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 BCO2Q9BYV7 579 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 SCINQ9Y6U3 715 aa11.05□□□□□ -0.64
HDAC9-210ENST00000428307 PHF2O75151 1096 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 RGS2P41220 211 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 PSEN2P49810 448 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 TAS2R40P59535 323 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 YWHAEP62258 255 aaKnown RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 ATP13A4Q4VNC1 1196 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 GLRA4Q5JXX5 417 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 DCUN1D2Q6PH85 259 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 JAMLQ86YT9 394 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 CCDC50Q8IVM0 306 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 WHAMMQ8TF30 809 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 C1orf54Q8WWF1 131 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 ZMAT2Q96NC0 199 aaKnown RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 ERP44Q9BS26 406 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 ZFYVE28Q9HCC9 887 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 TJP2Q9UDY2 1190 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 MTUS1Q9ULD2 1270 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 CEP83Q9Y592 693 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms