RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 PCDHGC3Q9UN70 934 aa28.34■■■□□ 2.13
SH3GL3-202ENST00000427482 PGRMC1O00264 195 aaKnown RBP28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 RECQL4O94761 1208 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 COMTP21964 271 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 CDH8P55286 799 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 PTP4A2Q12974 167 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 ZBTB6Q15916 424 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 DCAF12L1Q5VU92 463 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 TFAP2BQ92481 460 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 BTBD6Q96KE9 485 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 C11orf70Q9BRQ4 267 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 ADAM22Q9P0K1 906 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 TMEM59LQ9UK28 342 aa28.33■■■□□ 2.13
SH3GL3-202ENST00000427482 ZRANB2O95218 330 aaKnown RBP eCLIP28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 RNASE9P60153 205 aaKnown RBP28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 C1QBPQ07021 282 aaKnown RBP28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 LIN9Q5TKA1 542 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 HNRNPLLQ8WVV9 542 aaKnown RBP28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 CARD9Q9H257 536 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 NOC2LQ9Y3T9 749 aaKnown RBP28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 TRPV2Q9Y5S1 764 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 PAEPP09466 180 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 CST5P28325 142 aaPredicted RBP28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 RAD23BP54727 409 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 FAM228AQ86W67 206 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 CD101Q93033 1021 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 LRRC1Q9BTT6 524 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 ARFGAP3Q9NP61 516 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 TTC7AQ9ULT0 858 aaPredicted RBP28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 CDY2AQ9Y6F7 541 aa28.32■■■□□ 2.12
SH3GL3-202ENST00000427482 M0QZ92 97 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 ASGR1P07306 291 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 MCM3P25205 808 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 CDH5P33151 784 aaPredicted RBP28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 C2CD6Q53TS8 623 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 CCSAPQ6IQ19 270 aaPredicted RBP28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 MMS22LQ6ZRQ5 1243 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 RSPH3Q86UC2 560 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 SERINC5Q86VE9 423 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 SESTD1Q86VW0 696 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 CD99L2Q8TCZ2 262 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 WHAMMQ8TF30 809 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 WNT8AQ9H1J5 351 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 FAM124BQ9H5Z6 455 aaPredicted RBP28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 ANAPC7Q9UJX3 599 aa28.31■■■□□ 2.12
SH3GL3-202ENST00000427482 CILPO75339 1184 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 TRPA1O75762 1119 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 SEC31AO94979 1220 aaKnown RBP28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 HOXD10P28358 340 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 KCNA10Q16322 511 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 FAM47CQ5HY64 1035 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 UBL4BQ8N7F7 174 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 TMEM35BQ8NCS4 154 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 BEST2Q8NFU1 509 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 ALG3Q92685 438 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 APOL6Q9BWW8 343 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 ZNF518BQ9C0D4 1074 aa28.3■■■□□ 2.12
SH3GL3-202ENST00000427482 ERLIN1O75477 346 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 HMGCRP04035 888 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 MMP8P22894 467 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 AKAP5P24588 427 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 TNNC1P63316 161 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 MAP3K21Q5TCX8 1036 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 RUBCNQ92622 972 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 WNT8BQ93098 351 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 TUBGCP4Q9UGJ1 667 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 APLP1P51693 650 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 MYO1EQ12965 1108 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 GLE1Q53GS7 698 aaKnown RBP28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 PLEKHA7Q6IQ23 1121 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 C8orf74Q6P047 294 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 LLGL2Q6P1M3 1020 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 SLC4A11Q8NBS3 891 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 C1orf131Q8NDD1 294 aaKnown RBP28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 KRT35Q92764 455 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 TWNKQ96RR1 684 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 ELOVL4Q9GZR5 314 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 HMGXB4Q9UGU5 601 aa28.29■■■□□ 2.12
SH3GL3-202ENST00000427482 MED7O43513 233 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 RRP9O43818 475 aaKnown RBP28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 CD19P15391 556 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 CTNNA2P26232 953 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 INCA1Q0VD86 236 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 XKR4Q5GH76 650 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 GLRA4Q5JXX5 417 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 PHLDB2Q86SQ0 1253 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 RPAINQ86UA6 219 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 IPPQ9Y573 584 aa28.28■■■□□ 2.12
SH3GL3-202ENST00000427482 SPOPO43791 374 aa28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 RPLP2P05387 115 aaKnown RBP28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 PEX5P50542 639 aa28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 CPNE8Q86YQ8 564 aa28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 TTC39CQ8N584 583 aa28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 WDTC1Q8N5D0 677 aa28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 C18orf25Q96B23 403 aaPredicted RBP28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 TMEM176AQ96HP8 235 aa28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 RNPC3Q96LT9 517 aaKnown RBP28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 TSPAN18Q96SJ8 248 aa28.27■■■□□ 2.12
SH3GL3-202ENST00000427482 MRPL47Q9HD33 250 aaKnown RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms