RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 TMEM119Q4V9L6 283 aa12.32□□□□□ -0.44
SNX30-202ENST00000416585 MAML2Q8IZL2 1156 aaPredicted RBP12.32□□□□□ -0.44
SNX30-202ENST00000416585 TMX3Q96JJ7 454 aa12.32□□□□□ -0.44
SNX30-202ENST00000416585 KIF2CQ99661 725 aa12.32□□□□□ -0.44
SNX30-202ENST00000416585 TBX20Q9UMR3 447 aa12.32□□□□□ -0.44
SNX30-202ENST00000416585 SMG5Q9UPR3 1016 aaKnown RBP12.32□□□□□ -0.44
SNX30-202ENST00000416585 ASB3Q9Y575 518 aa12.32□□□□□ -0.44
SNX30-202ENST00000416585 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
SNX30-202ENST00000416585 SPTBN4Q9H254 2564 aa12.32□□□□□ -0.44
SNX30-202ENST00000416585 GREB1Q4ZG55 1949 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 HEPACAM2A8MVW5 462 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 CENPBP07199 599 aaPredicted RBP12.31□□□□□ -0.44
SNX30-202ENST00000416585 LONP1P36776 959 aaKnown RBP12.31□□□□□ -0.44
SNX30-202ENST00000416585 VIPR2P41587 438 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 EPHA5P54756 1037 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 DUSP4Q13115 394 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 MTAPQ13126 283 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 GPR17Q13304 367 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 C8orf34Q49A92 452 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 LARP1BQ659C4 914 aaKnown RBP12.31□□□□□ -0.44
SNX30-202ENST00000416585 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 TSSK4Q6SA08 328 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 MFSD6LQ8IWD5 586 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 THEM5Q8N1Q8 247 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
SNX30-202ENST00000416585 SUMF1Q8NBK3 374 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 RMDN1Q96DB5 314 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
SNX30-202ENST00000416585 CHRDQ9H2X0 955 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 ATXN3LQ9H3M9 355 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 LMAN1LQ9HAT1 526 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 TRPV5Q9NQA5 729 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 PRMT8Q9NR22 394 aaPredicted RBP12.31□□□□□ -0.44
SNX30-202ENST00000416585 DSEQ9UL01 958 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 USP18Q9UMW8 372 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 ANAPC1Q9H1A4 1944 aa12.31□□□□□ -0.44
SNX30-202ENST00000416585 MYH10P35580 1976 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 MYO16Q9Y6X6 1858 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 MTMR11A4FU01 709 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
SNX30-202ENST00000416585 PIGRP01833 764 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 PLCG1P19174 1290 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 TXLNAP40222 546 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 AARSP49588 968 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX30-202ENST00000416585 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 MCM6Q14566 821 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 ENOX2Q16206 610 aaKnown RBP12.3□□□□□ -0.44
SNX30-202ENST00000416585 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 SPATA1Q5VX52 437 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 ADALQ6DHV7 355 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 JADE1Q6IE81 842 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 MAP4K3Q8IVH8 894 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 ZBTB44Q8NCP5 570 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 SHKBP1Q8TBC3 707 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 LARP4BQ92615 738 aaKnown RBP12.3□□□□□ -0.44
SNX30-202ENST00000416585 RAD54LQ92698 747 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 SENP8Q96LD8 212 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 ZSWIM3Q96MP5 696 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 HAPLN2Q9GZV7 340 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 EPC1Q9H2F5 836 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 C8orf33Q9H7E9 229 aaPredicted RBP12.3□□□□□ -0.44
SNX30-202ENST00000416585 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 DERAQ9Y315 318 aa12.3□□□□□ -0.44
SNX30-202ENST00000416585 MYO15AQ9UKN7 3530 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 F5P12259 2224 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 CHADO15335 359 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 CCNE1P24864 410 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 GABRR2P28476 465 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 CDC25CP30307 473 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 TUFMP49411 452 aaKnown RBP12.29□□□□□ -0.44
SNX30-202ENST00000416585 TAF6P49848 677 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 LILRA4P59901 499 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 LMNB2Q03252 620 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 KARSQ15046 597 aaKnown RBP12.29□□□□□ -0.44
SNX30-202ENST00000416585 PTPAQ15257 358 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 ZBTB6Q15916 424 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 RSPO4Q2I0M5 234 aaPredicted RBP12.29□□□□□ -0.44
SNX30-202ENST00000416585 SLC39A12Q504Y0 691 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 ARHGAP29Q52LW3 1261 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 ARSHQ5FYA8 562 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 GPR158Q5T848 1215 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 CENPPQ6IPU0 288 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 PRR23BQ6ZRT6 265 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 KCNN1Q92952 543 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 PSMG2Q969U7 264 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 ZNF560Q96MR9 790 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 PYM1Q9BRP8 204 aaKnown RBP12.29□□□□□ -0.44
SNX30-202ENST00000416585 ASB7Q9H672 318 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 CPSF3Q9UKF6 684 aaKnown RBP12.29□□□□□ -0.44
SNX30-202ENST00000416585 AGO2Q9UKV8 859 aaKnown RBP12.29□□□□□ -0.44
SNX30-202ENST00000416585 CDV3Q9UKY7 258 aaKnown RBP12.29□□□□□ -0.44
SNX30-202ENST00000416585 EXOC7Q9UPT5 735 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 SLC27A5Q9Y2P5 690 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 KIAA1549LQ6ZVL6 1849 aa12.29□□□□□ -0.44
SNX30-202ENST00000416585 VPS13AQ96RL7 3174 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms