RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF473Q8WTR7 871 aaKnown RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 TNFRSF25Q93038 417 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 FAXDC2Q96IV6 333 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 CAPZA3Q96KX2 299 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 TTLL2Q9BWV7 592 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 MAK16Q9BXY0 300 aaKnown RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 SLC40A1Q9NP59 571 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 HPF1Q9NWY4 346 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 AIPL1Q9NZN9 384 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 SEPT10Q9P0V9 454 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 HDAC6Q9UBN7 1215 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 TMEM98Q9Y2Y6 226 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 PCDHGA4Q9Y5G9 962 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 SLC30A1Q9Y6M5 507 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 B2RBV5 119 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 H7C0S8 307 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 KPNA6O60684 536 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 MAFO75444 373 aaPredicted RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 NEBLO76041 1014 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 CCND1P24385 295 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 COPB1P53618 953 aaKnown RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 BACE1P56817 501 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 SLC8A3P57103 927 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 UBXN1Q04323 297 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 GRIN2CQ14957 1233 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 ODF1Q14990 250 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 KRT31Q15323 416 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 C11orf91Q3C1V1 193 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 GLE1Q53GS7 698 aaKnown RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 PRR16Q569H4 304 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 COX20Q5RI15 118 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 USP17L6PQ6QN14 398 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 CCDC121Q6ZUS5 278 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 CCDC13Q8IYE1 715 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 BLIDQ8IZY5 108 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 TRIM56Q9BRZ2 755 aaKnown RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 PI4K2AQ9BTU6 479 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 KIAA1683Q9H0B3 1180 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 FOXP1Q9H334 677 aaPredicted RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 TRPV5Q9NQA5 729 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 LRCH1Q9Y2L9 728 aa9.98□□□□□ -0.81
SNHG3-201ENST00000413987 REXO2Q9Y3B8 237 aaKnown RBP9.98□□□□□ -0.81
SNHG3-201ENST00000413987 PAPPA2Q9BXP8 1791 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 SRGAP2O75044 1071 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 FLOT1O75955 427 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 TBX18O95935 607 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 COL9A1P20849 921 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 IRS1P35568 1242 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 ADH7P40394 386 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 STX17P56962 302 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 GRIN1Q05586 938 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 CDC16Q13042 620 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PTGISQ16647 500 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 TTMPQ5BVD1 217 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 TREML2Q5T2D2 321 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 TMEM151BQ8IW70 566 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 CD302Q8IX05 232 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 GSPT2Q8IYD1 628 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 CCDC170Q8IYT3 715 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 ZNF619Q8N2I2 560 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PPM1KQ8N3J5 372 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 ARFGAP2Q8N6H7 521 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 SLC30A5Q8TAD4 765 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 EPS8L3Q8TE67 593 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 UTP15Q8TED0 518 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 P3H4Q92791 437 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 USP13Q92995 863 aaPredicted RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 CCDC114Q96M63 670 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 TEX13BQ9BXU2 312 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 RABEP2Q9H5N1 569 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 BATF3Q9NR55 127 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 NSMCE4AQ9NXX6 385 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 SUCOQ9UBS9 1254 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 RWDD2AQ9UIY3 292 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PCDHA6Q9UN73 950 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PCDHA4Q9UN74 947 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PCDHA8Q9Y5H6 950 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PCDHA1Q9Y5I3 950 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 A0A1W2PQC6 194 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 SART1O43290 800 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 ADCY3O60266 1144 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 SNX4O95219 450 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 FAM107AO95990 144 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 HOXA13P31271 388 aaPredicted RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 MTHFRP42898 656 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PPA1Q15181 289 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 FAM26DQ5JW98 314 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 DNAJB7Q7Z6W7 309 aaPredicted RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PCYOX1LQ8NBM8 494 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 SCG3Q8WXD2 468 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 DDX1Q92499 740 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 TBC1D5Q92609 795 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 ZNF669Q96BR6 464 aaPredicted RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 CCT8L2Q96SF2 557 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 P2RX7Q99572 595 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 PYM1Q9BRP8 204 aaKnown RBP9.97□□□□□ -0.81
SNHG3-201ENST00000413987 ZMYND12Q9H0C1 365 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 CSADQ9Y600 493 aa9.97□□□□□ -0.81
SNHG3-201ENST00000413987 XPOTO43592 962 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms