RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 RTP3Q9BQQ7 232 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 MAN1C1Q9NR34 630 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 GDAP2Q9NXN4 497 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 CDH22Q9UJ99 828 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 FRMD4BQ9Y2L6 1034 aa14.19□□□□□ -0.14
HDAC8-210ENST00000412342 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 GOLGA6L22H0YM25 854 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 H7C4K7 107 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 CYB561D2O14569 222 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 ABLIM3O94929 683 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 VNN1O95497 513 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 STAU1O95793 577 aaKnown RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 KRT19P08727 400 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 ODC1P11926 461 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 FKBP3Q00688 224 aaKnown RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 YWHAHQ04917 246 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 BFSP1Q12934 665 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 STIM1Q13586 685 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 SMAD2Q15796 467 aaKnown RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 PUS10Q3MIT2 529 aaKnown RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 CTXN3Q4LDR2 81 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 INTS8Q75QN2 995 aaKnown RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 C12orf76Q8N812 135 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 CMASQ8NFW8 434 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 NELFBQ8WX92 580 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 TSG101Q99816 390 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 XYLT2Q9H1B5 865 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 L1RE1Q9UN81 338 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 USP15Q9Y4E8 981 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-210ENST00000412342 C5orf42Q9H799 3197 aa14.18□□□□□ -0.14
HDAC8-210ENST00000412342 TULP1O00294 542 aaPredicted RBP14.17□□□□□ -0.14
HDAC8-210ENST00000412342 IKBKBO14920 756 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 CETN3O15182 167 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 SLC16A3O15427 465 aaKnown RBP14.17□□□□□ -0.14
HDAC8-210ENST00000412342 VNN2O95498 520 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 SPATA31D3P0C874 917 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 TRIM49P0CI25 452 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 TRIM49CP0CI26 452 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 VAMP7P51809 220 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 AP3M2P53677 418 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 PPP3CAQ08209 521 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 ZACNQ401N2 412 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 WSCD1Q658N2 575 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 OVOS1Q6IE37 1185 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 KLHL10Q6JEL2 608 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 SPATA31D4Q6ZUB0 917 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 KREMEN2Q8NCW0 462 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 OR10T2Q8NGX3 314 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 ZNF707Q96C28 371 aaPredicted RBP14.17□□□□□ -0.14
HDAC8-210ENST00000412342 HPDLQ96IR7 371 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 APOL5Q9BWW9 433 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 ADAM7Q9H2U9 754 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 PLEKHA4Q9H4M7 779 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 VRTNQ9H8Y1 702 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 SFXN1Q9H9B4 322 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 CTNND2Q9UQB3 1225 aa14.17□□□□□ -0.14
HDAC8-210ENST00000412342 ARHGEF37A1IGU5 675 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 RFPL2O75678 378 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 MYL6P60660 151 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 ITIH3Q06033 890 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 PAK1Q13153 545 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 SOWAHAQ2M3V2 549 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 RARS2Q5T160 578 aaKnown RBP14.16□□□□□ -0.14
HDAC8-210ENST00000412342 SV2AQ7L0J3 742 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 GPR149Q86SP6 731 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 USP37Q86T82 979 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 OSTM1Q86WC4 334 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 PDCL2Q8N4E4 241 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 TOP6BLQ8N6T0 577 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 ZNF461Q8TAF7 563 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 TMEM209Q96SK2 561 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 OXCT2Q9BYC2 517 aaPredicted RBP14.16□□□□□ -0.14
HDAC8-210ENST00000412342 RHOBTB2Q9BYZ6 727 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 DSEQ9UL01 958 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 SNX9Q9Y5X1 595 aa14.16□□□□□ -0.14
HDAC8-210ENST00000412342 DOCK6Q96HP0 2047 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 NOTCH4Q99466 2003 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 OR6C75A6NL08 312 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 GABRDO14764 452 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 ZMYND10O75800 440 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 MBD3O95983 291 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 OR4Q2P0C623 313 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 EPB41P11171 864 aaKnown RBP14.15□□□□□ -0.14
HDAC8-210ENST00000412342 ATF2P15336 505 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 STX17P56962 302 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 MYO1EQ12965 1108 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 DPCR1Q3MIW9 517 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 TPGS2Q68CL5 300 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 TMC5Q6UXY8 1006 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 MLKLQ8NB16 471 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 SPATA18Q8TC71 538 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 KBTBD7Q8WVZ9 684 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 CEP63Q96MT8 703 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 ZDHHC7Q9NXF8 308 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 DPP7Q9UHL4 492 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 NME7Q9Y5B8 376 aa14.15□□□□□ -0.14
HDAC8-210ENST00000412342 PTPRDP23468 1912 aa14.14□□□□□ -0.15
HDAC8-210ENST00000412342 BICDL2A1A5D9 508 aa14.14□□□□□ -0.15
HDAC8-210ENST00000412342 SEC24AO95486 1093 aa14.14□□□□□ -0.15
HDAC8-210ENST00000412342 C8AP07357 584 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms