RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 FAM171A1Q5VUB5 890 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 ZC3H18Q86VM9 953 aaKnown RBP7.84□□□□□ -1.15
UBE2F-204ENST00000409953 SRRM1Q8IYB3 904 aaKnown RBP7.84□□□□□ -1.15
UBE2F-204ENST00000409953 KBTBD3Q8NAB2 608 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 SMARCC2Q8TAQ2 1214 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 IPO4Q8TEX9 1081 aaKnown RBP7.84□□□□□ -1.15
UBE2F-204ENST00000409953 ARHGAP45Q92619 1136 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 MTMR8Q96EF0 704 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 ZNF302Q9NR11 478 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 TNNQ9UQP3 1299 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 SLC27A5Q9Y2P5 690 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 UBIAD1Q9Y5Z9 338 aa7.84□□□□□ -1.15
UBE2F-204ENST00000409953 PTPRDP23468 1912 aa7.84□□□□□ -1.16
UBE2F-204ENST00000409953 A0A1W2PQD8 194 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 ARL5CA6NH57 179 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 PRRG1O14668 218 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 FOXP2O15409 715 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 FLRT2O43155 660 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 TNFSF14O43557 240 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 ZFYP08048 801 aaPredicted RBP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 ATP4AP20648 1035 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 PCBP4P57723 403 aaKnown RBP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 RPL6Q02878 288 aaKnown RBP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 ZNF33AQ06730 810 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 TRAF1Q13077 416 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 PTPRNQ16849 979 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 MAP7D1Q3KQU3 841 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 NAIF1Q69YI7 327 aaPredicted RBP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 ZNF787Q6DD87 383 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 USP17L6PQ6QN14 398 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 CATSPER4Q7RTX7 472 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 STAG2Q8N3U4 1231 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 EZH1Q92800 747 aaPredicted RBP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 THAP11Q96EK4 314 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 SEC62Q99442 399 aaKnown RBP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 P2RY13Q9BPV8 354 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 ZKSCAN3Q9BRR0 538 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.83□□□□□ -1.16
UBE2F-204ENST00000409953 GPR88Q9GZN0 384 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 KAT14Q9H8E8 782 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 IL21RQ9HBE5 538 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 GPRC5CQ9NQ84 441 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 MIOSQ9NXC5 875 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 CEP131Q9UPN4 1083 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 BTBD3Q9Y2F9 522 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 CDY1Q9Y6F8 540 aa7.83□□□□□ -1.16
UBE2F-204ENST00000409953 NFASCO94856 1347 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 A0A087WZ62 844 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ANO9A1A5B4 782 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ALDH1A2O94788 518 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ITGA4P13612 1032 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 TRIM27P14373 513 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 GALK1P51570 392 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 GUCA2AQ02747 115 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 TARDBPQ13148 414 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBE2F-204ENST00000409953 HSP90AA2PQ14568 343 aaPredicted RBP7.82□□□□□ -1.16
UBE2F-204ENST00000409953 IQCEQ6IPM2 695 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ABHD15Q6UXT9 468 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ARID3BQ8IVW6 561 aaPredicted RBP7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ELMOD1Q8N336 334 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 TMTC2Q8N394 836 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 SHKBP1Q8TBC3 707 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 KIF1BPQ96EK5 621 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ZFP42Q96MM3 310 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 FDXACB1Q9BRP7 624 aaPredicted RBP7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ZDHHC5Q9C0B5 715 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 UBN1Q9NPG3 1134 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ASAH2Q9NR71 780 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 KCNH7Q9NS40 1196 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 TM7SF3Q9NS93 570 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 CACNG4Q9UBN1 327 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBE2F-204ENST00000409953 FNDC3AQ9Y2H6 1198 aaKnown RBP7.82□□□□□ -1.16
UBE2F-204ENST00000409953 KIAA1549LQ6ZVL6 1849 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 ADGRG4Q8IZF6 3080 aa7.82□□□□□ -1.16
UBE2F-204ENST00000409953 OTOL1A6NHN0 477 aaPredicted RBP7.81□□□□□ -1.16
UBE2F-204ENST00000409953 DDX39AO00148 427 aaKnown RBP7.81□□□□□ -1.16
UBE2F-204ENST00000409953 KLK10O43240 276 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 MARCH6O60337 910 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 CILPO75339 1184 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 CCNE2O96020 404 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 ZNF883P0CG24 379 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 ELF1P32519 619 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 AFMP43652 599 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 PTH1RQ03431 593 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 ITGB3BPQ13352 177 aaPredicted RBP7.81□□□□□ -1.16
UBE2F-204ENST00000409953 BYSLQ13895 437 aaKnown RBP7.81□□□□□ -1.16
UBE2F-204ENST00000409953 IGFBP7Q16270 282 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 QPCTQ16769 361 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 UBXN11Q5T124 520 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 STXBP5Q5T5C0 1151 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 SWSAP1Q6NVH7 229 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 BLOC1S3Q6QNY0 202 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 USP49Q70CQ1 688 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 DGKHQ86XP1 1220 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 LEMD2Q8NC56 503 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 BPIFB1Q8TDL5 484 aa7.81□□□□□ -1.16
UBE2F-204ENST00000409953 KCNE4Q8WWG9 221 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms