RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PROSCO94903 275 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 CYP2C9P11712 490 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 MMP8P22894 467 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 CPT1AP50416 773 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 IRX5P78411 483 aaPredicted RBP22.01■■□□□ 1.11
USP39-203ENST00000409470 DR1Q01658 176 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 DCAF4L1Q3SXM0 396 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 SMYD5Q6GMV2 418 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 PLEKHA7Q6IQ23 1121 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 CATSPER4Q7RTX7 472 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 EIF1ADQ8N9N8 165 aaKnown RBP22.01■■□□□ 1.11
USP39-203ENST00000409470 TFAP2BQ92481 460 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 BCO2Q9BYV7 579 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 MTUS1Q9ULD2 1270 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.01■■□□□ 1.11
USP39-203ENST00000409470 CALB1P05937 261 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 MYL3P08590 195 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 CD19P15391 556 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 POLR2BP30876 1174 aaKnown RBP22.01■■□□□ 1.11
USP39-203ENST00000409470 ATICP31939 592 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 CDH8P55286 799 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 APBB1IPQ7Z5R6 666 aaPredicted RBP22.01■■□□□ 1.11
USP39-203ENST00000409470 DDX42Q86XP3 938 aaKnown RBP eCLIP22.01■■□□□ 1.11
USP39-203ENST00000409470 SLC13A5Q86YT5 568 aaPredicted RBP22.01■■□□□ 1.11
USP39-203ENST00000409470 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.01■■□□□ 1.11
USP39-203ENST00000409470 ZNF518BQ9C0D4 1074 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 ZFYVE28Q9HCC9 887 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 VPS18Q9P253 973 aa22.01■■□□□ 1.11
USP39-203ENST00000409470 SMIM35A0A1B0GVV1 85 aa22■■□□□ 1.11
USP39-203ENST00000409470 TNPO2O14787 897 aaKnown RBP22■■□□□ 1.11
USP39-203ENST00000409470 TLR3O15455 904 aaKnown RBP22■■□□□ 1.11
USP39-203ENST00000409470 PHF2O75151 1096 aa22■■□□□ 1.11
USP39-203ENST00000409470 GPR32O75388 356 aa22■■□□□ 1.11
USP39-203ENST00000409470 NPTXRO95502 500 aa22■■□□□ 1.11
USP39-203ENST00000409470 P4HA1P13674 534 aa22■■□□□ 1.11
USP39-203ENST00000409470 GGCXP38435 758 aa22■■□□□ 1.11
USP39-203ENST00000409470 GRM5P41594 1212 aa22■■□□□ 1.11
USP39-203ENST00000409470 PSEN2P49810 448 aa22■■□□□ 1.11
USP39-203ENST00000409470 TSEN2Q8NCE0 465 aaKnown RBP22■■□□□ 1.11
USP39-203ENST00000409470 GADD45GIP1Q8TAE8 222 aaPredicted RBP22■■□□□ 1.11
USP39-203ENST00000409470 FAXDC2Q96IV6 333 aa22■■□□□ 1.11
USP39-203ENST00000409470 OSMRQ99650 979 aa22■■□□□ 1.11
USP39-203ENST00000409470 RAB17Q9H0T7 212 aa22■■□□□ 1.11
USP39-203ENST00000409470 PCDHGC3Q9UN70 934 aa22■■□□□ 1.11
USP39-203ENST00000409470 AGAP1Q9UPQ3 857 aa22■■□□□ 1.11
USP39-203ENST00000409470 C2CD2Q9Y426 696 aa22■■□□□ 1.11
USP39-203ENST00000409470 INHBEP58166 350 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 KCTD19Q17RG1 926 aaPredicted RBP21.99■■□□□ 1.11
USP39-203ENST00000409470 RUFY4Q6ZNE9 571 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 PRELID2Q8N945 189 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 FEZF2Q8TBJ5 459 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 SOCS4Q8WXH5 440 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 MAGOHBQ96A72 148 aaKnown RBP21.99■■□□□ 1.11
USP39-203ENST00000409470 KIF12Q96FN5 646 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 HPDLQ96IR7 371 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 APBA2Q99767 749 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 SMYD3Q9H7B4 428 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 ITGA11Q9UKX5 1188 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 FAN1Q9Y2M0 1017 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 MBLAC1A4D2B0 266 aaPredicted RBP21.99■■□□□ 1.11
USP39-203ENST00000409470 BHMG1C9JSJ3 638 aaPredicted RBP21.99■■□□□ 1.11
USP39-203ENST00000409470 DAPK3O43293 454 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 MED7O43513 233 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 HSF2BPO75031 334 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 SYF2O95926 243 aaKnown RBP21.99■■□□□ 1.11
USP39-203ENST00000409470 SLC10A3P09131 477 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 EIF4BP23588 611 aaKnown RBP21.99■■□□□ 1.11
USP39-203ENST00000409470 CHRNA3P32297 505 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 BEX3Q00994 111 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 DHX34Q14147 1143 aaKnown RBP21.99■■□□□ 1.11
USP39-203ENST00000409470 CXorf38Q8TB03 319 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 TRIM51Q9BSJ1 452 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 SDCBP2Q9H190 292 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 CDHR5Q9HBB8 845 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.99■■□□□ 1.11
USP39-203ENST00000409470 DPP3Q9NY33 737 aa21.99■■□□□ 1.11
USP39-203ENST00000409470 GJB6O95452 261 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 RBP5P82980 135 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 ERICH1Q86X53 443 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 NT5DC4Q86YG4 428 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 CD302Q8IX05 232 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 DNAJB3Q8WWF6 145 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 C18orf8Q96DM3 657 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 DPH5Q9H2P9 285 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 VRTNQ9H8Y1 702 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 FAM114A2Q9NRY5 505 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 USTQ9Y2C2 406 aa21.98■■□□□ 1.11
USP39-203ENST00000409470 TCRBV7S2A1N4TA0A589 114 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 FAM187AA6NFU0 413 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 AGPSO00116 658 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 PAEPP09466 180 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 HOXA11P31270 313 aaPredicted RBP21.97■■□□□ 1.11
USP39-203ENST00000409470 SSR1P43307 286 aaKnown RBP21.97■■□□□ 1.11
USP39-203ENST00000409470 RAD23BP54727 409 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 GYS2P54840 703 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 DAB2IPQ5VWQ8 1189 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 ALS2CLQ60I27 953 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 DNAJC24Q6P3W2 148 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 SLC27A1Q6PCB7 646 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 RIN2Q8WYP3 895 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms