RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 NOL4O94818 638 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 ADCY5O95622 1261 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 CALCAP01258 141 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 ATICP31939 592 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 CA8P35219 290 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 PNPLA4P41247 253 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 ASPAP45381 313 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 RAPGEF1Q13905 1077 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 SOWAHAQ2M3V2 549 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 CPLX3Q8WVH0 158 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 ERGIC2Q96RQ1 377 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 TGS1Q96RS0 853 aaKnown RBP15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 HMGXB4Q9UGU5 601 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 CHD7Q9P2D1 2997 aa15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 TMEM189-UBE2V1I3L0A0 370 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 DNAJB1P25685 340 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 AARSP49588 968 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 POLR2FP61218 127 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 GOLGA8FQ08AF8 430 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 GOLGA8DPQ0D2H9 430 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 ZNF394Q53GI3 561 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 RTP2Q5QGT7 225 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 KLHDC7AQ5VTJ3 777 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 IQCEQ6IPM2 695 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 PRSS55Q6UWB4 352 aaPredicted RBP15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 OSTM1Q86WC4 334 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 GLYCTKQ8IVS8 523 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 VPS52Q8N1B4 723 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 GDPD5Q8WTR4 605 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 LRCH3Q96II8 777 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 SUSD3Q96L08 255 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 KREMEN1Q96MU8 473 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 GANQ9H2C0 597 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 APEX2Q9UBZ4 518 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 DNAJC12Q9UKB3 198 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 NME7Q9Y5B8 376 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 MYO7AQ13402 2215 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 SF3B1O75533 1304 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 HUS1O60921 280 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 ACAT1P24752 427 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 PBX1P40424 430 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 SMAD3P84022 425 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 CUL2Q13617 745 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 CCDC142Q17RM4 750 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 TMC6Q7Z403 805 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 APPL2Q8NEU8 664 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 FBXO22Q8NEZ5 403 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 NEK11Q8NG66 645 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 LPIN3Q9BQK8 851 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 GDAP2Q9NXN4 497 aa15.11■□□□□ 0.01
CHRNA1-204ENST00000409323 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 RNF225M0QZC1 329 aaPredicted RBP15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 GRM6O15303 877 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 TPM3P06753 285 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 PDGFRBP09619 1106 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 UCHL3P15374 230 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 RPL17P18621 184 aaKnown RBP15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 TRIM21P19474 475 aaKnown RBP15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 LMO2P25791 158 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 ERVK-21P61565 698 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 ADGRF2Q8IZF7 708 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 SPC24Q8NBT2 197 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 OR6B3Q8NGW1 331 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 KBTBD7Q8WVZ9 684 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 TAF4BQ92750 862 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 FAM161BQ96MY7 647 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 TMEM209Q96SK2 561 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 VRTNQ9H8Y1 702 aa15.1■□□□□ 0.01
CHRNA1-204ENST00000409323 COL4A4P53420 1690 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 M0QZQ0 153 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 STAU1O95793 577 aaKnown RBP15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 OR4Q2P0C623 313 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 ODC1P11926 461 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 PPM1AP35813 382 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 USP8P40818 1118 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 KRT17Q04695 432 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 GPM6BQ13491 265 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 DDX53Q86TM3 631 aaKnown RBP15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 VSTM4Q8IW00 320 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 SPPL3Q8TCT6 385 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 POF1BQ8WVV4 589 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 RIN2Q8WYP3 895 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 TWNKQ96RR1 684 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 BCO2Q9BYV7 579 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 DPEP3Q9H4B8 488 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 ACP6Q9NPH0 428 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 PCDHB8Q9UN66 801 aa15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-204ENST00000409323 ATG2AQ2TAZ0 1938 aa15.08■□□□□ 0.01
CHRNA1-204ENST00000409323 A0A1W2PQC6 194 aa15.08■□□□□ 0
CHRNA1-204ENST00000409323 FAM170AA1A519 330 aa15.08■□□□□ 0
CHRNA1-204ENST00000409323 TRAPPC3O43617 180 aa15.08■□□□□ 0
CHRNA1-204ENST00000409323 ATP2C2O75185 946 aa15.08■□□□□ 0
CHRNA1-204ENST00000409323 KRT5P13647 590 aa15.08■□□□□ 0
CHRNA1-204ENST00000409323 P4HA1P13674 534 aa15.08■□□□□ 0
CHRNA1-204ENST00000409323 IRS1P35568 1242 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms