RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CGRRF1Q99675 332 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 PITPNM3Q9BZ71 974 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 RBAKQ9NYW8 714 aaPredicted RBP11.36□□□□□ -0.59
CLIP4-204ENST00000404424 SMG5Q9UPR3 1016 aaKnown RBP11.36□□□□□ -0.59
CLIP4-204ENST00000404424 USTQ9Y2C2 406 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 STARD13Q9Y3M8 1113 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLIP4-204ENST00000404424 ATP5HO75947 161 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 CFHP08603 1231 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 CCNB1P14635 433 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 MMP8P22894 467 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 NAMPTP43490 491 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 ACOT2P49753 483 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 OAZ1P54368 228 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
CLIP4-204ENST00000404424 MORF4L2Q15014 288 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 RASA2Q15283 850 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 TMED2Q15363 201 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 CGB2Q6NT52 195 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 RGS9BPQ6ZS82 235 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 ALLCQ8N6M5 410 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 SLITRK1Q96PX8 696 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 SAYSD1Q9NPB0 183 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 ZNF277Q9NRM2 450 aaPredicted RBP11.36□□□□□ -0.59
CLIP4-204ENST00000404424 GGT7Q9UJ14 662 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 ZNF148Q9UQR1 794 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 TMEM191CA6NGB0 347 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ATP2A1O14983 1001 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ASMTLO95671 621 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 TMEM191BP0C7N4 346 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 CCND1P24385 295 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 HSPA1LP34931 641 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ALDH5A1P51649 535 aaPredicted RBP11.35□□□□□ -0.59
CLIP4-204ENST00000404424 AP3M2P53677 418 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 POLGP54098 1239 aaPredicted RBP11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ACTR2P61160 394 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 MTMR2Q13614 643 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 EMC2Q15006 297 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ZKSCAN8Q15776 578 aaPredicted RBP11.35□□□□□ -0.59
CLIP4-204ENST00000404424 CCDC142Q17RM4 750 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 CYP4F22Q6NT55 531 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 FBF1Q8TES7 1133 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 TBC1D31Q96DN5 1066 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 FAM118BQ9BPY3 351 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 MAF1Q9H063 256 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 DNPEPQ9ULA0 475 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 FOXO6A8MYZ6 492 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 K7ERI5 159 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 RGS20O76081 388 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 LSM8O95777 96 aaKnown RBP11.35□□□□□ -0.59
CLIP4-204ENST00000404424 GJC1P36383 396 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 WNT7BP56706 349 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 TAP1Q03518 808 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 DGKZQ13574 1117 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 SPARCL1Q14515 664 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 GNPTABQ3T906 1256 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 MTERF2Q49AM1 385 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 NIM1KQ8IY84 436 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 DENND1AQ8TEH3 1009 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ZNF606Q8WXB4 792 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ATG4CQ96DT6 458 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 FAM84AQ96KN4 292 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 IMPG2Q9BZV3 1241 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ZNF518BQ9C0D4 1074 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 PORCNQ9H237 461 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 TXLNGQ9NUQ3 528 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 DDX56Q9NY93 547 aaKnown RBP11.35□□□□□ -0.59
CLIP4-204ENST00000404424 SLC24A2Q9UI40 661 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 RIPK3Q9Y572 518 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
CLIP4-204ENST00000404424 ALOX15BO15296 676 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 UNC5CO95185 931 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 KRT1P04264 644 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 SUPT20HL2P0C7V6 817 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 GCAP28676 217 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 FOXN2P32314 431 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 MSH2P43246 934 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 ARSEP51690 589 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 ZNF132P52740 706 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 WDR4P57081 412 aaKnown RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 MGAT5Q09328 741 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 SUPT20HL1Q3ZLR7 823 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 TLDC1Q6P9B6 456 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 PCGF5Q86SE9 256 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 DEPTORQ8TB45 409 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 N4BP2L2Q92802 583 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 RSRC1Q96IZ7 334 aaKnown RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 RMDN2Q96LZ7 410 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 RAB3IPQ96QF0 476 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 SMC6Q96SB8 1091 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 MSTO1Q9BUK6 570 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 PHACTR1Q9C0D0 580 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 SHOC2Q9UQ13 582 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 NUB1Q9Y5A7 615 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 COL4A5P29400 1685 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 A0A0B4J269 797 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 SPATA31C2B4DYI2 1134 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms