RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 GJB7Q6PEY0 223 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 RRAGAQ7L523 313 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 DDX53Q86TM3 631 aaKnown RBP35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 GRPEL1Q9HAV7 217 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 APEX2Q9UBZ4 518 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 L1RE1Q9UN81 338 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 A0A1W2PQC6 194 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 TKTP29401 623 aaKnown RBP35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 CEP57Q86XR8 500 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 RNF168Q8IYW5 571 aaPredicted RBP35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 APPL2Q8NEU8 664 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 FBXO22Q8NEZ5 403 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 ARNTL2Q8WYA1 636 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 ARID3AQ99856 593 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 C11orf84Q9BUA3 381 aaPredicted RBP35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 SMYD3Q9H7B4 428 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 PCDHB8Q9UN66 801 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 ODC1P11926 461 aa35.67■■■■□ 3.3
CSNK1E-204ENST00000403904 PBX1P40424 430 aa35.67■■■■□ 3.3
CSNK1E-204ENST00000403904 RAP1GAPP47736 663 aa35.67■■■■□ 3.3
CSNK1E-204ENST00000403904 CDH8P55286 799 aa35.67■■■■□ 3.3
CSNK1E-204ENST00000403904 UBE2TQ9NPD8 197 aaPredicted RBP35.67■■■■□ 3.3
CSNK1E-204ENST00000403904 WEE2P0C1S8 567 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 GSE1Q14687 1217 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 KLHDC7AQ5VTJ3 777 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 WSCD1Q658N2 575 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 PDCL2Q8N4E4 241 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 TOP6BLQ8N6T0 577 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 KAT5Q92993 513 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 SDCBP2Q9H190 292 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 PLCB1Q9NQ66 1216 aa35.66■■■■□ 3.3
CSNK1E-204ENST00000403904 SOD2P04179 222 aa35.65■■■■□ 3.3
CSNK1E-204ENST00000403904 CUL2Q13617 745 aa35.65■■■■□ 3.3
CSNK1E-204ENST00000403904 LIMS2Q7Z4I7 341 aa35.65■■■■□ 3.3
CSNK1E-204ENST00000403904 VPS52Q8N1B4 723 aa35.65■■■■□ 3.3
CSNK1E-204ENST00000403904 SPPL3Q8TCT6 385 aa35.65■■■■□ 3.3
CSNK1E-204ENST00000403904 BCO2Q9BYV7 579 aa35.65■■■■□ 3.3
CSNK1E-204ENST00000403904 TRANK1O15050 2925 aa35.65■■■■□ 3.3
CSNK1E-204ENST00000403904 EPHB6O15197 1021 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 NOL4O94818 638 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 FGFR3P22607 806 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 USP41Q3LFD5 358 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 PDZRN4Q6ZMN7 1036 aaPredicted RBP35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 DPH6Q7L8W6 267 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 PUF60Q9UHX1 559 aaKnown RBP35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 TSC2P49815 1807 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 SYN3O14994 580 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 ZNF75DP51815 510 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 RTP2Q5QGT7 225 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 NEK11Q8NG66 645 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 FAXDC2Q96IV6 333 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 MRPL45Q9BRJ2 306 aaKnown RBP35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 TTPALQ9BTX7 342 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 GANQ9H2C0 597 aa35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 AJAP1Q9UKB5 411 aaPredicted RBP35.64■■■■□ 3.3
CSNK1E-204ENST00000403904 ARHGEF37A1IGU5 675 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 H3BNC9 293 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 SOX1O00570 391 aaPredicted RBP35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 GRM6O15303 877 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 UCHL3P15374 230 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 GCNT1Q02742 428 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 GPM6BQ13491 265 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 ADGRF2Q8IZF7 708 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 POF1BQ8WVV4 589 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 KBTBD7Q8WVZ9 684 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 KREMEN1Q96MU8 473 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 HERC2P3Q9BVR0 1158 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 CHST7Q9NS84 486 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 DNAJC12Q9UKB3 198 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 DSEQ9UL01 958 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 FHOD1Q9Y613 1164 aa35.63■■■■□ 3.29
CSNK1E-204ENST00000403904 MYO9BQ13459 2157 aa35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 EPOPA6NHQ4 379 aa35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 CYP11A1P05108 521 aa35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 TYMPP19971 482 aa35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 TBXAS1P24557 533 aaPredicted RBP35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 DNAJB1P25685 340 aa35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 IQCEQ6IPM2 695 aa35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 LZTS1Q9Y250 596 aa35.62■■■■□ 3.29
CSNK1E-204ENST00000403904 CD58P19256 250 aa35.61■■■■□ 3.29
CSNK1E-204ENST00000403904 KIAA1841Q6NSI8 718 aa35.61■■■■□ 3.29
CSNK1E-204ENST00000403904 TMEM86AQ8N2M4 240 aa35.61■■■■□ 3.29
CSNK1E-204ENST00000403904 ZNF576Q9H609 170 aa35.61■■■■□ 3.29
CSNK1E-204ENST00000403904 CYP3A43Q9HB55 503 aa35.61■■■■□ 3.29
CSNK1E-204ENST00000403904 STK39Q9UEW8 545 aa35.61■■■■□ 3.29
CSNK1E-204ENST00000403904 TACC1O75410 805 aa35.6■■■■□ 3.29
CSNK1E-204ENST00000403904 CSPG5O95196 566 aa35.6■■■■□ 3.29
CSNK1E-204ENST00000403904 YWHAHQ04917 246 aaPredicted RBP35.6■■■■□ 3.29
CSNK1E-204ENST00000403904 ARHGAP44Q17R89 818 aa35.6■■■■□ 3.29
CSNK1E-204ENST00000403904 VARS2Q5ST30 1063 aaKnown RBP35.6■■■■□ 3.29
CSNK1E-204ENST00000403904 OVOS1Q6IE37 1185 aa35.6■■■■□ 3.29
CSNK1E-204ENST00000403904 METTL23Q86XA0 190 aa35.6■■■■□ 3.29
CSNK1E-204ENST00000403904 C2CD2LO14523 706 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 TRIM21P19474 475 aaKnown RBP35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 MFAP3P55082 362 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 POLR2FP61218 127 aaKnown RBP35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 UBE3AQ05086 875 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 OSTM1Q86WC4 334 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 VSTM4Q8IW00 320 aa35.59■■■■□ 3.29
CSNK1E-204ENST00000403904 RIN2Q8WYP3 895 aaPredicted RBP35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms