RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TUBGCP4Q9UGJ1 667 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 H7C4K7 107 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 DCLK1O15075 740 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 RPP40O75818 363 aaKnown RBP13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 LARGE1O95461 756 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CDR1P51861 262 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 FOSBP53539 338 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 DUSP4Q13115 394 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CPLX2Q6PUV4 134 aaKnown RBP13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 UNQ6494/PRO21346Q6UXR6 183 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CACNA2D4Q7Z3S7 1137 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 RALGPS2Q86X27 583 aaPredicted RBP13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 KDF1Q8NAX2 398 aaPredicted RBP13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MSANTD3Q96H12 275 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 LOXL4Q96JB6 756 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PDRG1Q9NUG6 133 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SLC27A5Q9Y2P5 690 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.33
SPTLC1P3-201ENST00000403408 DENND4CQ5VZ89 1909 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ARHGEF35A5YM69 484 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 FOXD2O60548 495 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 RPA1P27694 616 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 RPL9P32969 192 aaKnown RBP13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MPLP40238 635 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SPAG1Q07617 926 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MAPK7Q13164 816 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ZNF568Q3ZCX4 644 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PLK5Q496M5 336 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ZNF280DQ6N043 979 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ELMOD1Q8N336 334 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 NECAB1Q8N987 351 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 C12orf50Q8NA57 414 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 LEMD2Q8NC56 503 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CCDC94Q9BW85 323 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 HAPLN2Q9GZV7 340 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 DUSP15Q9H1R2 295 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 IL21Q9HBE4 155 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 HPS4Q9NQG7 708 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PI4KAP42356 2102 aa13.01□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ANTXRLA6NF34 631 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 K7ERI5 159 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 M0QZQ0 153 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PPEF2O14830 753 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 JAK2O60674 1132 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 OAZ2O95190 189 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CPB1P15086 417 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MCM4P33991 863 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 NPTX2P47972 431 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 GUCY2FP51841 1108 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 EFNA5P52803 228 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CYP4F8P98187 520 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CENPPQ6IPU0 288 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 DIS3L2Q8IYB7 885 aaKnown RBP13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 EZH1Q92800 747 aaPredicted RBP13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 GATA6Q92908 595 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 E2F7Q96AV8 911 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ZC3H10Q96K80 434 aaKnown RBP13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 GPR88Q9GZN0 384 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SLC38A7Q9NVC3 462 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ARHGAP28Q9P2N2 729 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MAFFQ9ULX9 164 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 NUB1Q9Y5A7 615 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 APC2O95996 2303 aa13□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MTMR11A4FU01 709 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 C4orf47A7E2U8 309 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CDKL5O76039 1030 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 EGFP01133 1207 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 XBP1P17861 261 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 U2AF2P26368 475 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 MCM7P33993 719 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 YARSP54577 528 aaKnown RBP12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 PPP2R5AQ15172 486 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 TMEM196Q5HYL7 178 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 GPR158Q5T848 1215 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 RNF43Q68DV7 783 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 TRIM68Q6AZZ1 485 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SYNPOQ8N3V7 929 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 ACAP3Q96P50 834 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 HHIPQ96QV1 700 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 LPIN3Q9BQK8 851 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SLC46A2Q9BY10 475 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 TOPORSQ9NS56 1045 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 CCL26Q9Y258 94 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 SCN1AP35498 2009 aa12.99□□□□□ -0.33
SPTLC1P3-201ENST00000403408 THADAQ6YHU6 1953 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms