RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ACKR2O00590 384 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 TP73O15350 636 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 GJB6O95452 261 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 HOXC6P09630 235 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 NF2P35240 595 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 GJC1P36383 396 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 CETN2P41208 172 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 MAGEA9P43362 315 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 CAV1Q03135 178 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 PPARDQ03181 441 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 CCNG2Q16589 344 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 ZNF699Q32M78 642 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 Q3C1V9 767 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 ZNF568Q3ZCX4 644 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 ZNF394Q53GI3 561 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 ATF7IP2Q5U623 682 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 MICALCLQ6ZW33 695 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 TMEM35BQ8NCS4 154 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 C3orf20Q8ND61 904 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 SMARCAD1Q9H4L7 1026 aa14.69□□□□□ -0.06
PRAME-202ENST00000398743 ATXN2Q99700 1313 aaKnown RBP14.69□□□□□ -0.06
PRAME-202ENST00000398743 TMEM191CA6NGB0 347 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 SMIM23A6NLE4 172 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 INO80B-WBP1J3KQ70 363 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 AGTP01019 485 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 TNNC2P02585 160 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 ATF2P15336 505 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 BRD2P25440 801 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 RPL7AP62424 266 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 PPIL2Q13356 520 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 TMEM132AQ24JP5 1023 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 UBAP2Q5T6F2 1119 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 WDR78Q5VTH9 848 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 CCDC62Q6P9F0 684 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 RHBDF2Q6PJF5 856 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 THNSL1Q8IYQ7 743 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 FBXO41Q8TF61 875 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 TRAPPC12Q8WVT3 735 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 ANKRD36BP1Q96IX9 119 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 SCLT1Q96NL6 688 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 TRAIPQ9BWF2 469 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 INO80BQ9C086 356 aaPredicted RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 ZNF518BQ9C0D4 1074 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 STMN4Q9H169 189 aaPredicted RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 CDC42EP4Q9H3Q1 356 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 FZD8Q9H461 694 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 PTPRHQ9HD43 1115 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 HBP1O60381 514 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 TXNP10599 105 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 OSBPP22059 807 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 IVDP26440 423 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 TTLL12Q14166 644 aaPredicted RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 TRIP13Q15645 432 aaPredicted RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 DNAJC24Q6P3W2 148 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 UHMK1Q8TAS1 419 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 EPS8L3Q8TE67 593 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 RBM41Q96IZ5 413 aaKnown RBP14.68□□□□□ -0.06
PRAME-202ENST00000398743 MCEEQ96PE7 176 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 AAASQ9NRG9 546 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 CEP83Q9Y592 693 aa14.68□□□□□ -0.06
PRAME-202ENST00000398743 RASGRF2O14827 1237 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 B4GALT4O60513 344 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 GJB1P08034 283 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 WEE2P0C1S8 567 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 EIF4BP23588 611 aaKnown RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 ADCY8P40145 1251 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 MMP13P45452 471 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 ITGA8P53708 1063 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 OSTNP61366 133 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 YWHAEP62258 255 aaKnown RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 NFX1Q12986 1120 aaKnown RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 SMYD5Q6GMV2 418 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 GPAT2Q6NUI2 795 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 EFCAB12Q6NXP0 572 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 DCUN1D2Q6PH85 259 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 SCARA5Q6ZMJ2 495 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 MOB2Q70IA6 237 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 ZNF365Q70YC5 407 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 CCDC89Q8N998 374 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 RAPGEF5Q92565 580 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 COPS5Q92905 334 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 ROPN1BQ9BZX4 212 aaPredicted RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 XYLT2Q9H1B5 865 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 MROH8Q9H579 483 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 ROPN1Q9HAT0 212 aaPredicted RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 PCDHGC3Q9UN70 934 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 A0A087WUV0 522 aaPredicted RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 B4GALT5O43286 388 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 KIAA0754O94854 1291 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 CDH5P33151 784 aaPredicted RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 ASPAP45381 313 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 CLCN3P51790 818 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 TAP1Q03518 808 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 TTLL4Q14679 1199 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 ZFYVE27Q5T4F4 411 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 FASTKD5Q7L8L6 764 aaKnown RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 RCOR2Q8IZ40 523 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 PPM1EQ8WY54 764 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 OPTNQ96CV9 577 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms