RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RTN4RL1Q86UN2 441 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 NPAS4Q8IUM7 802 aa20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 ABI1Q8IZP0 508 aa20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 TRIM11Q96F44 468 aa20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 ZFP42Q96MM3 310 aa20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 ARID3AQ99856 593 aa20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 DESI2Q9BSY9 194 aa20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 LRFN2Q9ULH4 789 aa20.31■□□□□ 0.84
TSPAN4-204ENST00000397404 KIF5CO60282 957 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 HUS1O60921 280 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 SCNN1GP51170 649 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 LILRA4P59901 499 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 GFPT1Q06210 699 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 NOMO2Q5JPE7 1267 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 CCDC122Q5T0U0 273 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 SLC47A2Q86VL8 602 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 ACRBPQ8NEB7 543 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 APPL2Q8NEU8 664 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 LINC01599Q8WXQ3 324 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 MMS19Q96T76 1030 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 OSBPL7Q9BZF2 842 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 TRMT1Q9NXH9 659 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 DSEQ9UL01 958 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 NENFQ9UMX5 172 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 CEP83Q9Y592 693 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 A0A0A6YYK5 440 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 TMEM189-UBE2V1I3L0A0 370 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 DDX3XO00571 662 aaKnown RBP eCLIP20.3■□□□□ 0.841e-6■■■■□ 19.5
TSPAN4-204ENST00000397404 RTN2O75298 545 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 BAIAP3O94812 1187 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 KIF4AO95239 1232 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 UPP1Q16831 310 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 MFSD5Q6N075 450 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 NOP9Q86U38 636 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 GLYCTKQ8IVS8 523 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 RNF169Q8NCN4 708 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 DDX1Q92499 740 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 LPPQ93052 612 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 FAM84AQ96KN4 292 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 NT5C1AQ9BXI3 368 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 ISCUQ9H1K1 167 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.3■□□□□ 0.844e-7■■■■■ 121.4
TSPAN4-204ENST00000397404 PRKAG2Q9UGJ0 569 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 PCDHGC3Q9UN70 934 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 REXO2Q9Y3B8 237 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 SNX9Q9Y5X1 595 aa20.3■□□□□ 0.84
TSPAN4-204ENST00000397404 ANKRD62A6NC57 917 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 PODXLO00592 558 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 H2AFZP0C0S5 128 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 PNMA6AP0CW24 399 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 RAG1P15918 1043 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 CYP2C18P33260 490 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 AARSP49588 968 aaKnown RBP eCLIP20.29■□□□□ 0.848e-6■■■■■ 52.4
TSPAN4-204ENST00000397404 SOX4Q06945 474 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 DCLRE1AQ6PJP8 1040 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 H2AFVQ71UI9 128 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 TMEM176AQ96HP8 235 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 VCPIP1Q96JH7 1222 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 PPP1R12CQ9BZL4 782 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 PDCL3Q9H2J4 239 aa20.29■□□□□ 0.84
TSPAN4-204ENST00000397404 ZNF263O14978 683 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 WEE2P0C1S8 567 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 MYBL1P10243 752 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 VDRP11473 427 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 LHX1P48742 406 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 GUCY2FP51841 1108 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 TTC3P53804 2025 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 CCL23P55773 120 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 FMO1Q01740 532 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 TNIP3Q96KP6 325 aa20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 FAM193BQ96PV7 902 aaPredicted RBP20.28■□□□□ 0.84
TSPAN4-204ENST00000397404 TDRD15B5MCY1 1934 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 MEIS3P2A8K0S8 358 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 TRAPPC3O43617 180 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 TMEM253P0C7T8 217 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 CD58P19256 250 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 WARSP23381 471 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 ETF1P62495 437 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 CYP27A1Q02318 531 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 DSC1Q08554 894 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 TCEAL1Q15170 157 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 MSANTD4Q8NCY6 345 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 TRIM58Q8NG06 486 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 LNX1Q8TBB1 728 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 ZNF606Q8WXB4 792 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 CTNNBL1Q8WYA6 563 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 SCLYQ96I15 445 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 MIS12Q9H081 205 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 LHX5Q9H2C1 402 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 SMYD3Q9H7B4 428 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 SEPT11Q9NVA2 429 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 POLIQ9UNA4 740 aa20.27■□□□□ 0.84
TSPAN4-204ENST00000397404 THAP12O43422 761 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 RHOT2Q8IXI1 618 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 CRIPAKQ8N1N5 446 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 ALS2CR12Q96Q35 445 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 TMEM175Q9BSA9 504 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 CXCL16Q9H2A7 254 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 SNX25Q9H3E2 840 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms