RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TMEM8AQ9HCN3 771 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 RNF19AQ9NV58 838 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 PUF60Q9UHX1 559 aaKnown RBP15.98■□□□□ 0.15
CAPN3-207ENST00000397200 RAB21Q9UL25 225 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 SNX12Q9UMY4 172 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 F8VZ95 297 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 PTGESO14684 152 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 MOCS3O95396 460 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 THP07101 528 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 MAGEA10P43363 369 aaPredicted RBP15.97■□□□□ 0.15
CAPN3-207ENST00000397200 SCNN1GP51170 649 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 DEFB103AP81534 67 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 CETN1Q12798 172 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 BIRC3Q13489 604 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 NAB2Q15742 525 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 CLLU1OSQ5K130 101 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 SV2AQ7L0J3 742 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 GPIHBP1Q8IV16 184 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 CRIPAKQ8N1N5 446 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 BEST2Q8NFU1 509 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 FAM84AQ96KN4 292 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 SYT11Q9BT88 431 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 STK33Q9BYT3 514 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 GPR88Q9GZN0 384 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 MTIF3Q9H2K0 278 aaKnown RBP15.97■□□□□ 0.15
CAPN3-207ENST00000397200 SLC38A7Q9NVC3 462 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 APEX2Q9UBZ4 518 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 UBQLN1Q9UMX0 589 aaKnown RBP15.97■□□□□ 0.15
CAPN3-207ENST00000397200 PCDHGC5Q9Y5F6 944 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 INPPL1O15357 1258 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 PHACTR2O75167 634 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 STAT1P42224 750 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 EPC2Q52LR7 807 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 NOMO2Q5JPE7 1267 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 GSTCDQ8NEC7 633 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 HERVK_113Q902F9 699 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 TOP1MTQ969P6 601 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 NOX5Q96PH1 765 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 PPP1R10Q96QC0 940 aaKnown RBP15.97■□□□□ 0.15
CAPN3-207ENST00000397200 MIOSQ9NXC5 875 aa15.97■□□□□ 0.15
CAPN3-207ENST00000397200 PTPRSQ13332 1948 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 FNDC1Q4ZHG4 1894 aaPredicted RBP15.96■□□□□ 0.15
CAPN3-207ENST00000397200 POMCP01189 267 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 C4BPAP04003 597 aaKnown RBP15.96■□□□□ 0.15
CAPN3-207ENST00000397200 SOX5P35711 763 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 AFF1P51825 1210 aaKnown RBP15.96■□□□□ 0.15
CAPN3-207ENST00000397200 ITIH3Q06033 890 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 GRIK3Q13003 919 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 BMS1Q14692 1282 aaKnown RBP15.96■□□□□ 0.15
CAPN3-207ENST00000397200 ZBTB6Q15916 424 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 ZACNQ401N2 412 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 TDRD10Q5VZ19 366 aaKnown RBP15.96■□□□□ 0.15
CAPN3-207ENST00000397200 GJB7Q6PEY0 223 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 C15orf39Q6ZRI6 1047 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 RSPH1Q8WYR4 309 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 C18orf25Q96B23 403 aaPredicted RBP15.96■□□□□ 0.15
CAPN3-207ENST00000397200 PARD6BQ9BYG5 372 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 EPC1Q9H2F5 836 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 DPP3Q9NY33 737 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 OGFRQ9NZT2 677 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 KANSL3Q9P2N6 904 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 TUBGCP4Q9UGJ1 667 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 ADAMTS1Q9UHI8 967 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 NAGPAQ9UK23 515 aa15.96■□□□□ 0.15
CAPN3-207ENST00000397200 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.96■□□□□ 0.15
CAPN3-207ENST00000397200 CCDC151A5D8V7 595 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 TBKBP1A7MCY6 615 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 ATP8B1O43520 1251 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 TUBBP07437 444 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 CYP3A5P20815 502 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 GATMP50440 423 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 GUCY2FP51841 1108 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 ARID5AQ03989 594 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 BRD3Q15059 726 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 FAM117BQ6P1L5 589 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 FBXL13Q8NEE6 735 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 CASD1Q96PB1 797 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 MRPL9Q9BYD2 267 aaKnown RBP15.95■□□□□ 0.14
CAPN3-207ENST00000397200 CXXC1Q9P0U4 656 aaPredicted RBP15.95■□□□□ 0.14
CAPN3-207ENST00000397200 DNAJC12Q9UKB3 198 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 ITGA11Q9UKX5 1188 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 INTUQ9ULD6 942 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 SLC4A7Q9Y6M7 1214 aa15.95■□□□□ 0.14
CAPN3-207ENST00000397200 CAPN15O75808 1086 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 DGKIO75912 1065 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 KRT19P08727 400 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 TCP1P17987 556 aaKnown RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 PIK3CAP42336 1068 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 RGS19P49795 217 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 RNASELQ05823 741 aaKnown RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 TRPC3Q13507 836 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 CC2D1AQ6P1N0 951 aaPredicted RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 TMCO3Q6UWJ1 677 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 CREG2Q8IUH2 290 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 C1orf127Q8N9H9 656 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 NOA1Q8NC60 698 aaKnown RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 SLC30A5Q8TAD4 765 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 TAS1R2Q8TE23 839 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 HNRNPLLQ8WVV9 542 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms