RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 TRIM72Q6ZMU5 477 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 UNC93AQ86WB7 457 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 LNX1Q8TBB1 728 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-209ENST00000397036 SPATA18Q8TC71 538 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 ELMO3Q96BJ8 720 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 MYO1AQ9UBC5 1043 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 POLIQ9UNA4 740 aa14.54□□□□□ -0.08
MCF2L-209ENST00000397036 PPEF2O14830 753 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 KRT86O43790 486 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 EFCAB14O75071 495 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 PFKMP08237 780 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 ARHGAP25P42331 645 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 AARSP49588 968 aaKnown RBP eCLIP14.53□□□□□ -0.08
MCF2L-209ENST00000397036 SCNN1GP51170 649 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 AFF1P51825 1210 aaKnown RBP14.53□□□□□ -0.08
MCF2L-209ENST00000397036 FMO1Q01740 532 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 KIF5AQ12840 1032 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 PTPN14Q15678 1187 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 NOMO2Q5JPE7 1267 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 GLYCTKQ8IVS8 523 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 RPUSD2Q8IZ73 545 aaKnown RBP14.53□□□□□ -0.08
MCF2L-209ENST00000397036 TOP6BLQ8N6T0 577 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 WHAMMQ8TF30 809 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 VWCEQ96DN2 955 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 SCLYQ96I15 445 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 PPP1R12CQ9BZL4 782 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 SDCBP2Q9H190 292 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 ISCUQ9H1K1 167 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 RNF19AQ9NV58 838 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 PCDHB7Q9Y5E2 793 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 BRCA2P51587 3418 aa14.53□□□□□ -0.08
MCF2L-209ENST00000397036 ABHD14A-ACY1A0A1B0GW23 586 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.52□□□□□ -0.08
MCF2L-209ENST00000397036 CAPN15O75808 1086 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 GNA15P30679 374 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 DSC1Q08554 894 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 IKBKEQ14164 716 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 UPP1Q16831 310 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 ARHGAP29Q52LW3 1261 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 CCDC122Q5T0U0 273 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 MFSD5Q6N075 450 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 DCLRE1AQ6PJP8 1040 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 KIAA1328Q86T90 577 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 NPAS4Q8IUM7 802 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 RNF10Q8N5U6 811 aaKnown RBP14.52□□□□□ -0.08
MCF2L-209ENST00000397036 URGCPQ8TCY9 931 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 ZNF606Q8WXB4 792 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 DNAI2Q9GZS0 605 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 SMYD3Q9H7B4 428 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 SNX9Q9Y5X1 595 aa14.52□□□□□ -0.08
MCF2L-209ENST00000397036 TTC3P53804 2025 aa14.52□□□□□ -0.09
MCF2L-209ENST00000397036 PDCD11Q14690 1871 aaKnown RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TRIM43BA6NCK2 446 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TMEM189-UBE2V1I3L0A0 370 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 PODXLO00592 558 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 SPTLC1O15269 473 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 RTN2O75298 545 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 CYP1A1P04798 512 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 H2AFZP0C0S5 128 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 RAD23BP54727 409 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 CDH8P55286 799 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 ETF1P62495 437 aaKnown RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TCEAL1Q15170 157 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 SOWAHAQ2M3V2 549 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 CLLU1OSQ5K130 101 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 H2AFVQ71UI9 128 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TMEM86AQ8N2M4 240 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TMEM130Q8N3G9 435 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 RNF169Q8NCN4 708 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 SLC20A1Q8WUM9 679 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TRIM43Q96BQ3 446 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TMEM176AQ96HP8 235 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 CALR3Q96L12 384 aaKnown RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 MMS19Q96T76 1030 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 ZNF518BQ9C0D4 1074 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 LACRTQ9GZZ8 138 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 PCDHGC3Q9UN70 934 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TET1Q8NFU7 2136 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 A0A0A6YYK5 440 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 ARHGEF37A1IGU5 675 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 ANKRD62A6NC57 917 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 RCCD1A6NED2 376 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 CLSTN1O94985 981 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 MMEP08473 750 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 VDRP11473 427 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 UNGP13051 313 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 CD58P19256 250 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 EN2P19622 333 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-209ENST00000397036 STILQ15468 1287 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TCTN1Q2MV58 587 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 SCARA5Q6ZMJ2 495 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 GPIHBP1Q8IV16 184 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 CRYBG2Q8N1P7 616 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 SLC4A11Q8NBS3 891 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 PCDHB18PQ96TA0 734 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 NT5C1AQ9BXI3 368 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 LHX5Q9H2C1 402 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 GOLGA2P5Q9HBQ8 144 aa14.51□□□□□ -0.09
MCF2L-209ENST00000397036 ACP6Q9NPH0 428 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms