RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 CPLX4Q7Z7G2 160 aa16.11■□□□□ 0.17
MCF2L-205ENST00000397017 RHOT1Q8IXI2 618 aa16.11■□□□□ 0.17
MCF2L-205ENST00000397017 NPLOC4Q8TAT6 608 aa16.11■□□□□ 0.17
MCF2L-205ENST00000397017 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
MCF2L-205ENST00000397017 DMAC2Q9NW81 257 aa16.11■□□□□ 0.17
MCF2L-205ENST00000397017 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 A0A0B4J269 797 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 CCDC188H7C350 402 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 GPR25O00155 361 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 VIMP08670 466 aaKnown RBP16.1■□□□□ 0.17
MCF2L-205ENST00000397017 CDH6P55285 790 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 PCYT2Q99447 389 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 FERMT1Q9BQL6 677 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 SIX2Q9NPC8 291 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 PLAAQ9Y263 795 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 COL4A5P29400 1685 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 CREB3O43889 395 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 HNRNPH3P31942 346 aaKnown RBP16.1■□□□□ 0.17
MCF2L-205ENST00000397017 SNX16P57768 344 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 PTENP60484 403 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 GNGT1P63211 74 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 TRADDQ15628 312 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 ATP13A4Q4VNC1 1196 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 LRFN2Q9ULH4 789 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 MAD1L1Q9Y6D9 718 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 ARAP2Q8WZ64 1704 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 RECQL4O94761 1208 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 PSEN2P49810 448 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 IQSEC1Q6DN90 963 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 MTHFD1LQ6UB35 978 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 WDR49Q8IV35 697 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 DHX35Q9H5Z1 703 aaKnown RBP16.1■□□□□ 0.17
MCF2L-205ENST00000397017 MLXIPLQ9NP71 852 aa16.1■□□□□ 0.17
MCF2L-205ENST00000397017 ANKRD65E5RJM6 399 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 I3L4J1 428 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 NDUFAB1O14561 156 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 SDC4P31431 198 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 AP3M2P53677 418 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 BCAR1P56945 870 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 OTUD6BQ8N6M0 293 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 C12orf29Q8N999 325 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 LPPQ93052 612 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 FIZ1Q96SL8 496 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 GPATCH2LQ9NWQ4 482 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 CACNG4Q9UBN1 327 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 ICAM3P32942 547 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 ARL2P36404 184 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 NDST1P52848 882 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 FMO1Q01740 532 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 DUSP28Q4G0W2 176 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 MAIP1Q8WWC4 291 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 WNT8AQ9H1J5 351 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 NXF3Q9H4D5 531 aaKnown RBP16.09■□□□□ 0.17
MCF2L-205ENST00000397017 XPNPEP3Q9NQH7 507 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 FBXL5Q9UKA1 691 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 NOVA2Q9UNW9 492 aaKnown RBP16.09■□□□□ 0.17
MCF2L-205ENST00000397017 MYH8P13535 1937 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 NNTQ13423 1086 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 GOLGA7BQ2TAP0 167 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 BBS9Q3SYG4 887 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 SHC3Q92529 594 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 SIK2Q9H0K1 926 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 UVRAGQ9P2Y5 699 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 KCNH4Q9UQ05 1017 aa16.09■□□□□ 0.17
MCF2L-205ENST00000397017 PYGMP11217 842 aa16.08■□□□□ 0.17
MCF2L-205ENST00000397017 APPL2Q8NEU8 664 aa16.08■□□□□ 0.17
MCF2L-205ENST00000397017 ZNF516Q92618 1163 aa16.08■□□□□ 0.17
MCF2L-205ENST00000397017 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.17
MCF2L-205ENST00000397017 COL24A1Q17RW2 1714 aa16.08■□□□□ 0.17
MCF2L-205ENST00000397017 IL18RAPO95256 599 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 EIF4BP23588 611 aaKnown RBP16.08■□□□□ 0.16
MCF2L-205ENST00000397017 PRKCIP41743 596 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 FAM71AQ8IYT1 594 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 CCDC63Q8NA47 563 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 KATNAL1Q9BW62 490 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 C10orf88Q9H8K7 445 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 FAM114A2Q9NRY5 505 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 H2AFXP16104 143 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-205ENST00000397017 CRHR2Q13324 411 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 ABRAQ8N0Z2 381 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 FEZF2Q8TBJ5 459 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 GAD1Q99259 594 aa16.08■□□□□ 0.16
MCF2L-205ENST00000397017 MMP3P08254 477 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 AKR1A1P14550 325 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 GNL1P36915 607 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-205ENST00000397017 KRT17Q04695 432 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 CLEC16AQ2KHT3 1053 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 CCDC38Q502W7 563 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 NT5DC3Q86UY8 548 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 METTL23Q86XA0 190 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 PALM2Q8IXS6 379 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 MCOLN2Q8IZK6 566 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 C18orf25Q96B23 403 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-205ENST00000397017 OSBPL8Q9BZF1 889 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 MOCS2O96007 188 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-205ENST00000397017 MYBL2P10244 700 aa16.07■□□□□ 0.16
MCF2L-205ENST00000397017 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms