RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CFHP08603 1231 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 ZSCAN5DPP0CG00 497 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 GZMAP12544 262 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 RARRES1P49788 294 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 SPDYAQ5MJ70 313 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 CLNKQ7Z7G1 428 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 RIBC1Q8N443 379 aaPredicted RBP25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 HAUS1Q96CS2 278 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 AGBL1Q96MI9 1066 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 GLIS2Q9BZE0 524 aaPredicted RBP25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 DCLK3Q9C098 648 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 NPHS2Q9NP85 383 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 SAR1AQ9NR31 198 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 SMAPO00193 183 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 MAN1A1P33908 653 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 FASTKD3Q14CZ7 662 aaKnown RBP25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 IZUMO3Q5VZ72 239 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 CDAN1Q8IWY9 1227 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 ATL2Q8NHH9 583 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 HELQQ8TDG4 1101 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 POMGNT1Q8WZA1 660 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 TMEM206Q9H813 350 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.36■■□□□ 1.656e-12■■■■■ 78.7
CSNK1E-203ENST00000396832 KIAA1586Q9HCI6 787 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 CAPN9O14815 690 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 KRT15P19012 456 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 GCAP28676 217 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 SLC1A5Q15758 541 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 CTC1Q2NKJ3 1217 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 TBC1D25Q3MII6 688 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 ACSBG2Q5FVE4 666 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 LRRC74BQ6ZQY2 392 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 ZNF365Q70YC5 407 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 B4GALNT2Q8NHY0 566 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 COL20A1Q9P218 1284 aa25.36■■□□□ 1.65
CSNK1E-203ENST00000396832 CA4P22748 312 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 MAGEA4P43358 317 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 NR1H3Q13133 447 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 KPNB1Q14974 876 aaKnown RBP25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 PKN2Q16513 984 aaKnown RBP25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 FAM182AQ5T1J6 154 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 ACSF2Q96CM8 615 aaPredicted RBP25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 BICD1Q96G01 975 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 SMC6Q96SB8 1091 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 CYLDQ9NQC7 956 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 C2CD2LO14523 706 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 VIL1P09327 827 aaKnown RBP25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 PLS3P13797 630 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 ETS1P14921 441 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 SLC34A1Q06495 639 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 ARHGAP22Q7Z5H3 698 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 CCNJLQ8IV13 435 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 DTX3LQ8TDB6 740 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 RBM15Q96T37 977 aaKnown RBP eCLIP25.35■■□□□ 1.651e-7■■■■■ 39.2
CSNK1E-203ENST00000396832 LTBP1Q14766 1721 aa25.35■■□□□ 1.65
CSNK1E-203ENST00000396832 BANF1O75531 89 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 TJP3O95049 919 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 ATP13A4Q4VNC1 1196 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 PLEKHG4Q58EX7 1191 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 CPXCR1Q8N123 301 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 NT5C1BQ96P26 610 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 C11orf70Q9BRQ4 267 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 UVRAGQ9P2Y5 699 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 MAGEA13PA6NCF6 341 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 HNRNPCL1O60812 293 aaKnown RBP25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 CCDC22O60826 627 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 TBX10O75333 385 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 FGFR1P11362 822 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 PSMC4P43686 418 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 P3H1Q32P28 736 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 HHATQ5VTY9 493 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 ARMC3Q5W041 872 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 KRT39Q6A163 491 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 SPOPLQ6IQ16 392 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 ACAD10Q6JQN1 1059 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 DDX1Q92499 740 aaKnown RBP25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 PRMT6Q96LA8 375 aaPredicted RBP25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 BTBD10Q9BSF8 475 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 SMG5Q9UPR3 1016 aaKnown RBP25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 SCN9AQ15858 1988 aa25.34■■□□□ 1.65
CSNK1E-203ENST00000396832 NFIBO00712 420 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 KRT10P13645 584 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 CFAP61Q8NHU2 1237 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 SPIRE2Q8WWL2 714 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 ZNF75CPQ92670 426 aaPredicted RBP25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 GATA6Q92908 595 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 ITFG2Q969R8 447 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 DCTN4Q9UJW0 460 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 TAS2R40P59535 323 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 ZRSR2Q15696 482 aaKnown RBP25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 LDHDQ86WU2 507 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 RELL1Q8IUW5 271 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 SAYSD1Q9NPB0 183 aa25.33■■□□□ 1.65
CSNK1E-203ENST00000396832 GOLGA8SH3BPF8 625 aa25.33■■□□□ 1.64
CSNK1E-203ENST00000396832 GOLGA8MH3BSY2 632 aa25.33■■□□□ 1.64
CSNK1E-203ENST00000396832 GSC2O15499 205 aa25.33■■□□□ 1.64
CSNK1E-203ENST00000396832 GRIN3BO60391 1043 aa25.33■■□□□ 1.64
CSNK1E-203ENST00000396832 YWHABP31946 246 aaKnown RBP25.33■■□□□ 1.64
CSNK1E-203ENST00000396832 MAIP1Q8WWC4 291 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms