RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ARMC9Q7Z3E5 817 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 IFNLR1Q8IU57 520 aaPredicted RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 ATL2Q8NHH9 583 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 ANKRD36BP1Q96IX9 119 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 SPON1Q9HCB6 807 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 ERAP1Q9NZ08 941 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 EVPLQ92817 2033 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 INO80B-WBP1J3KQ70 363 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 GAS8O95995 478 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 SHBGP04278 402 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 PAEPP09466 180 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 RALAP11233 206 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 IVDP26440 423 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 SSTR3P32745 418 aaPredicted RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 CCT5P48643 541 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 TFAMQ00059 246 aaKnown RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 CAV1Q03135 178 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 ARHGAP1Q07960 439 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 BYSLQ13895 437 aaKnown RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 TRMT10CQ7L0Y3 403 aaKnown RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 LINC01465Q8N7H1 131 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
NUP50-202ENST00000396096 FAM212AQ96EL1 285 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 NLRP4Q96MN2 994 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 OSBPL8Q9BZF1 889 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 INO80BQ9C086 356 aaPredicted RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 FHDC1Q9C0D6 1143 aaPredicted RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 CDT1Q9H211 546 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 SEMA4AQ9H3S1 761 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 LRRC4CQ9HCJ2 640 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 PDGFCQ9NRA1 345 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 PRMT7Q9NVM4 692 aaPredicted RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 NEU2Q9Y3R4 380 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 O00370 1275 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 EBAG9O00559 213 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 B4GALT5O43286 388 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 RIPK2O43353 540 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 BRD2P25440 801 aaKnown RBP17.81■□□□□ 0.44
NUP50-202ENST00000396096 GJA5P36382 358 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 CLCN3P51790 818 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 MAGOHP61326 146 aaKnown RBP17.81■□□□□ 0.44
NUP50-202ENST00000396096 SNAPC2Q13487 334 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 LAMC2Q13753 1193 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 SLC29A2Q14542 456 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 TMEM63BQ5T3F8 832 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 C9orf131Q5VYM1 1079 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 ARMCX2Q7L311 632 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 THNSL1Q8IYQ7 743 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 SNF8Q96H20 258 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 TSPYL1Q9H0U9 437 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 CNOT10Q9H9A5 744 aaKnown RBP17.81■□□□□ 0.44
NUP50-202ENST00000396096 BCCIPQ9P287 314 aaKnown RBP eCLIP17.81■□□□□ 0.44
NUP50-202ENST00000396096 PNMA3Q9UL41 463 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 PLXNB2O15031 1838 aa17.81■□□□□ 0.44
NUP50-202ENST00000396096 RBM47A0AV96 593 aaKnown RBP17.8■□□□□ 0.44
NUP50-202ENST00000396096 GJB1P08034 283 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 CD58P19256 250 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 ADCY2Q08462 1091 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 SNX1Q13596 522 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 DAB2IPQ5VWQ8 1189 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 CCDC50Q8IVM0 306 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 RCOR2Q8IZ40 523 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 WDTC1Q8N5D0 677 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 ATG4AQ8WYN0 398 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 BCO2Q9BYV7 579 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 RNPEPQ9H4A4 650 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 MINDY3Q9H8M7 445 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 RPF1Q9H9Y2 349 aaKnown RBP17.8■□□□□ 0.44
NUP50-202ENST00000396096 R3HDM2Q9Y2K5 976 aaKnown RBP17.8■□□□□ 0.44
NUP50-202ENST00000396096 NDUFAB1O14561 156 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 MAGEB2O15479 319 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 CAND2O75155 1236 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 MCF2P10911 925 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 EPHX2P34913 555 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 CETN2P41208 172 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 PHKA2P46019 1235 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 RPL7AP62424 266 aaKnown RBP17.8■□□□□ 0.44
NUP50-202ENST00000396096 ZNF252P-AS1Q0IIN9 211 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 ZNF792Q3KQV3 632 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 C6orf118Q5T5N4 469 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 WDR78Q5VTH9 848 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 TAPT1Q6NXT6 567 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 DNAJC24Q6P3W2 148 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 NIPA2Q8N8Q9 360 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 C3orf20Q8ND61 904 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 TFAP2BQ92481 460 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 EMID1Q96A84 441 aaPredicted RBP17.8■□□□□ 0.44
NUP50-202ENST00000396096 RBM41Q96IZ5 413 aaKnown RBP17.8■□□□□ 0.44
NUP50-202ENST00000396096 FAM107BQ9H098 131 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 LHX5Q9H2C1 402 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 IFT122Q9HBG6 1241 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 VTA1Q9NP79 307 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 AAASQ9NRG9 546 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 ASIC3Q9UHC3 531 aa17.8■□□□□ 0.44
NUP50-202ENST00000396096 COL1A2P08123 1366 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 DCDC2CA8MYV0 355 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 MYO1CO00159 1063 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 LGALS2P05162 132 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 WEE2P0C1S8 567 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms