RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 HPDLQ96IR7 371 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 MED15Q96RN5 788 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 MKNK1Q9BUB5 465 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 S1PR5Q9H228 398 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 CD207Q9UJ71 328 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 GRXCR2A6NFK2 248 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 PHACTR2O75167 634 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 SRGAP2BP0DMP2 458 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 EPB41P11171 864 aaKnown RBP17.81■□□□□ 0.44
CXCL1-201ENST00000395761 KRT13P13646 458 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 ARPP19P56211 112 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 MCCD1P59942 119 aaPredicted RBP17.81■□□□□ 0.44
CXCL1-201ENST00000395761 MYL6P60660 151 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 PPP3CAQ08209 521 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 MYO1EQ12965 1108 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 BIRC3Q13489 604 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 RAB33AQ14088 237 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 DPCR1Q3MIW9 517 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 OVOS1Q6IE37 1185 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 SLC8B1Q6J4K2 584 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 ZNF280DQ6N043 979 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 MLKLQ8NB16 471 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 MAN1C1Q9NR34 630 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 R3HCC1Q9Y3T6 440 aaKnown RBP17.81■□□□□ 0.44
CXCL1-201ENST00000395761 SNX9Q9Y5X1 595 aa17.81■□□□□ 0.44
CXCL1-201ENST00000395761 BICDL2A1A5D9 508 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 IKBKBO14920 756 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 SLC16A3O15427 465 aaKnown RBP17.8■□□□□ 0.44
CXCL1-201ENST00000395761 VNN1O95497 513 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 CYP11A1P05108 521 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 BMP1P13497 986 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 GCLMP48507 274 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 AP3M2P53677 418 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 NLRP12P59046 1061 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 ROR1Q01973 937 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 TRPC3Q13507 836 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 AAK1Q2M2I8 961 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 ZSCAN23Q3MJ62 389 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 PTCRAQ6ISU1 281 aaPredicted RBP17.8■□□□□ 0.44
CXCL1-201ENST00000395761 C15orf39Q6ZRI6 1047 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 SV2AQ7L0J3 742 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 KREMEN2Q8NCW0 462 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 ELMO3Q96BJ8 720 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 RTP3Q9BQQ7 232 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 GDAP2Q9NXN4 497 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 CDH22Q9UJ99 828 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 L1RE1Q9UN81 338 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 PLXNA3P51805 1871 aa17.8■□□□□ 0.44
CXCL1-201ENST00000395761 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 MBTPS2O43462 519 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 C1RP00736 705 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 OR4Q2P0C623 313 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 HOXB8P17481 243 aaPredicted RBP17.79■□□□□ 0.44
CXCL1-201ENST00000395761 ENPEPQ07075 957 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 ZACNQ401N2 412 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 RARS2Q5T160 578 aaKnown RBP17.79■□□□□ 0.44
CXCL1-201ENST00000395761 FOXR2Q6PJQ5 311 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 TMC5Q6UXY8 1006 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 FILIP1Q7Z7B0 1213 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 PDCL2Q8N4E4 241 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 SMRP1Q8NCR6 262 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 CEP63Q96MT8 703 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 TMEM209Q96SK2 561 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 MMRN2Q9H8L6 949 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 DZANK1Q9NVP4 752 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 RWDD2AQ9UIY3 292 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 FBXW11Q9UKB1 542 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 DSEQ9UL01 958 aa17.79■□□□□ 0.44
CXCL1-201ENST00000395761 ARHGEF37A1IGU5 675 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 HUS1O60921 280 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 RFPL2O75678 378 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 ABLIM3O94929 683 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 WEE2P0C1S8 567 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 IL9P15248 144 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 SMAD4Q13485 552 aaKnown RBP17.78■□□□□ 0.44
CXCL1-201ENST00000395761 NCOA4Q13772 614 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 SOWAHAQ2M3V2 549 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 SASS6Q6UVJ0 657 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 LIMS2Q7Z4I7 341 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 OSTM1Q86WC4 334 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 METTL23Q86XA0 190 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 OR10T2Q8NGX3 314 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 ZNF461Q8TAF7 563 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 FUCA2Q9BTY2 467 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 SRRTQ9BXP5 876 aaKnown RBP17.78■□□□□ 0.44
CXCL1-201ENST00000395761 PLEKHA4Q9H4M7 779 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 USP15Q9Y4E8 981 aaPredicted RBP17.78■□□□□ 0.44
CXCL1-201ENST00000395761 UNC80Q8N2C7 3258 aa17.78■□□□□ 0.44
CXCL1-201ENST00000395761 OR6C75A6NL08 312 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 SPDYE4A6NLX3 237 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 LRRN2O75325 713 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 HLA-DRAP01903 254 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 ATICP31939 592 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 CDR1P51861 262 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 PUS10Q3MIT2 529 aaKnown RBP17.77■□□□□ 0.44
CXCL1-201ENST00000395761 WDR72Q3MJ13 1102 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 TJAP1Q5JTD0 557 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 TOP6BLQ8N6T0 577 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms