RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 PGLYRP2Q96PD5 576 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 ACCSQ96QU6 501 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 KXD1Q9BQD3 176 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 TRIM9Q9C026 710 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-205ENST00000394892 ASB7Q9H672 318 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 MRPL44Q9H9J2 332 aaKnown RBP9.6□□□□□ -0.87
ATG4A-205ENST00000394892 SLC2A4RGQ9NR83 387 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 PANK4Q9NVE7 773 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 DLGAP2Q9P1A6 1054 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 SEL1LQ9UBV2 794 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 SIX4Q9UIU6 781 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 KCNH3Q9ULD8 1083 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 CA14Q9ULX7 337 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 PCDHA7Q9UN72 937 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 DERAQ9Y315 318 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 C2CD2Q9Y426 696 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 DOCK8Q8NF50 2099 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 PTPRZ1P23471 2315 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-205ENST00000394892 MTMR11A4FU01 709 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 TGFB1I1O43294 461 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 HCRTO43612 131 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 GCNT3O95395 438 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 CYP11A1P05108 521 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 EPHA5P54756 1037 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 YWHAHQ04917 246 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-205ENST00000394892 DNM1Q05193 864 aaKnown RBP9.59□□□□□ -0.87
ATG4A-205ENST00000394892 TWF1Q12792 350 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 DUSP4Q13115 394 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 GPR17Q13304 367 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 WSCD1Q658N2 575 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 SLFN12LQ6IEE8 588 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 CENPPQ6IPU0 288 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 CNNM4Q6P4Q7 775 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 BRSK2Q8IWQ3 736 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 CD302Q8IX05 232 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 GRAMD1CQ8IYS0 662 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 C1orf127Q8N9H9 656 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 POMGNT1Q8WZA1 660 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 DHX58Q96C10 678 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 LRRC3BQ96PB8 259 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 TSPAN18Q96SJ8 248 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 CORO1BQ9BR76 489 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 FAM213AQ9BRX8 229 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 MKNK1Q9BUB5 465 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 PCIF1Q9H4Z3 704 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 ZNF334Q9HCZ1 680 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-205ENST00000394892 TMLHEQ9NVH6 421 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 DPP3Q9NY33 737 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 RCOR1Q9UKL0 485 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 SLC27A5Q9Y2P5 690 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 MRPS23Q9Y3D9 190 aaKnown RBP9.59□□□□□ -0.87
ATG4A-205ENST00000394892 MTF2Q9Y483 593 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-205ENST00000394892 YIPF1Q9Y548 306 aa9.59□□□□□ -0.87
ATG4A-205ENST00000394892 TRIP11Q15643 1979 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 PRRG1O14668 218 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 CUTAO60888 179 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 PTPN2P17706 415 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 POU5F1Q01860 360 aaKnown RBP9.58□□□□□ -0.88
ATG4A-205ENST00000394892 FAM78AQ5JUQ0 283 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 STXBP5Q5T5C0 1151 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 RESP18Q5W5W9 173 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 LMBRD2Q68DH5 695 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-205ENST00000394892 OVOS1Q6IE37 1185 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 DSTYKQ6XUX3 929 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 DGLUCYQ7Z3D6 616 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 OSTM1Q86WC4 334 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 CBWD2Q8IUF1 395 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 ZNF687Q8N1G0 1237 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 OR5B17Q8NGF7 314 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 SHKBP1Q8TBC3 707 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 ZNF396Q96N95 335 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-205ENST00000394892 C7orf25Q9BPX7 421 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 DDX23Q9BUQ8 820 aaKnown RBP9.58□□□□□ -0.88
ATG4A-205ENST00000394892 FOXQ1Q9C009 403 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 ZCWPW1Q9H0M4 648 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 BLZF1Q9H2G9 400 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 TNMDQ9H2S6 317 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 TBC1D17Q9HA65 648 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 PDE11AQ9HCR9 933 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 SIT1Q9Y3P8 196 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
ATG4A-205ENST00000394892 ZFP37Q9Y6Q3 630 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-205ENST00000394892 OR6C75A6NL08 312 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 CYB561D2O14569 222 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 POLR2DO15514 142 aaKnown RBP9.57□□□□□ -0.88
ATG4A-205ENST00000394892 ACTN4O43707 911 aaKnown RBP9.57□□□□□ -0.88
ATG4A-205ENST00000394892 KLRC4O43908 158 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 EXTL3O43909 919 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 ECI2O75521 394 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 LRG1P02750 347 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 DCNP07585 359 aaKnown RBP9.57□□□□□ -0.88
ATG4A-205ENST00000394892 CPB1P15086 417 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 ATF6P18850 670 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 CD72P21854 359 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 GARTP22102 1010 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 POLR2BP30876 1174 aaKnown RBP9.57□□□□□ -0.88
ATG4A-205ENST00000394892 ELF1P32519 619 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 TXLNAP40222 546 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms