RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 XKR4Q5GH76 650 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 FAM47CQ5HY64 1035 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 TTC39CQ8N584 583 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 ACTRT1Q8TDG2 376 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 MS4A14Q96JA4 679 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 SELENOOQ9BVL4 669 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 SENP6Q9GZR1 1112 aaPredicted RBP12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 SDCBP2Q9H190 292 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 SMYD3Q9H7B4 428 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 RAB21Q9UL25 225 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 ALG6Q9Y672 507 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 SCN1AP35498 2009 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 DDX3YO15523 660 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 CDH5P33151 784 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 ZNF394Q53GI3 561 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 PASD1Q8IV76 773 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 RAET1EQ8TD07 263 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 WNT8BQ93098 351 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 ZSWIM1Q9BR11 485 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 ZNF518BQ9C0D4 1074 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 CXCL16Q9H2A7 254 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 EHD2Q9NZN4 543 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 FRMPD3Q5JV73 1810 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 GRIN2DO15399 1336 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 TARSL2A2RTX5 802 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 MIF4GDA9UHW6 222 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 CILPO75339 1184 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 CABYRO75952 493 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 RHOXF2BP0C7M4 288 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 KCNE1P15382 129 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 CLCN6P51797 869 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 RAD23BP54727 409 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 TNNC1P63316 161 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 MGAT3Q09327 533 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 INCA1Q0VD86 236 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 MYO1EQ12965 1108 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 PTPROQ16827 1216 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 LIN9Q5TKA1 542 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 RNF180Q86T96 592 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 RASGEF1CQ8N431 466 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 LRRC52Q8N7C0 313 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 TFAP2BQ92481 460 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 RHOXF2Q9BQY4 288 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 SMARCAL1Q9NZC9 954 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 CHORDC1Q9UHD1 332 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 UBQLN1Q9UMX0 589 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 IPPQ9Y573 584 aa12.19□□□□□ -0.46
SMARCAL1-203ENST00000392128 MED7O43513 233 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CHRNA1P02708 482 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 RRM1P23921 792 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 AKAP5P24588 427 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 VEGFBP49765 207 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CDH8P55286 799 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 PTP4A2Q12974 167 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 BRD3Q15059 726 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 USP38Q8NB14 1042 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 SMG8Q8ND04 991 aaKnown RBP12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 WHAMMQ8TF30 809 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 PNKPQ96T60 521 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CARD9Q9H257 536 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 ADAM22Q9P0K1 906 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 TUBGCP4Q9UGJ1 667 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 TTC7AQ9ULT0 858 aaPredicted RBP12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CCDC151A5D8V7 595 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 RPS6KA5O75582 802 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 COMTP21964 271 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 MMP8P22894 467 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 PTPN11Q06124 597 aaPredicted RBP12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 MESDQ14696 234 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 PTGISQ16647 500 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 TWF2Q6IBS0 349 aaKnown RBP12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 WDR93Q6P2C0 686 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 SLC4A11Q8NBS3 891 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 TMEM35BQ8NCS4 154 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CD101Q93033 1021 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 C11orf70Q9BRQ4 267 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 APOL6Q9BWW8 343 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 WNT8AQ9H1J5 351 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 TMEM59LQ9UK28 342 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 BARX2Q9UMQ3 279 aaPredicted RBP12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 CEP83Q9Y592 693 aa12.18□□□□□ -0.46
SMARCAL1-203ENST00000392128 SMIM28A0A1B0GU29 152 aa12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 PGRMC1O00264 195 aaKnown RBP12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 TLR3O15455 904 aaKnown RBP12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 XPOTO43592 962 aaKnown RBP12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 CEP104O60308 925 aa12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 CD4P01730 458 aa12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 GLRA4Q5JXX5 417 aa12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 PLEKHA7Q6IQ23 1121 aa12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 MMS22LQ6ZRQ5 1243 aa12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 UBL4BQ8N7F7 174 aa12.17□□□□□ -0.46
SMARCAL1-203ENST00000392128 C18orf25Q96B23 403 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms