RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 DNAJC3Q13217 504 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 C1orf186Q6ZWK4 172 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 MORC4Q8TE76 937 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 PAIP2BQ9ULR5 123 aaKnown RBP19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 AGTPBP1Q9UPW5 1226 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 DDX60Q8IY21 1712 aaKnown RBP19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 I3L4J1 428 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 C6orf222P0C671 652 aaPredicted RBP19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 RNASELQ05823 741 aaKnown RBP19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 UGCGQ16739 394 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 LACTB2Q53H82 288 aaPredicted RBP19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 EFCAB12Q6NXP0 572 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 TMEM270Q6UE05 265 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 TRIM74Q86UV6 250 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 TRIM73Q86UV7 250 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 SNCAIPQ9Y6H5 919 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 CCDC137Q6PK04 289 aaKnown RBP19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 JAMLQ86YT9 394 aa19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 CCDC97Q96F63 343 aaPredicted RBP19.9■□□□□ 0.78
PPFIA1-202ENST00000389547 CACNA1SQ13698 1873 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 IGLV3-22A0A075B6J6 115 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 EIF3DO15371 548 aaKnown RBP eCLIP19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 PRKCBP05771 671 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 HSD17B4P51659 736 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 FBXL13Q8NEE6 735 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 GORASP1Q9BQQ3 440 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 MRPL4Q9BYD3 311 aaKnown RBP19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 CARD9Q9H257 536 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 CHD4Q14839 1912 aa19.89■□□□□ 0.78
PPFIA1-202ENST00000389547 FAM187AA6NFU0 413 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 CALB2P22676 271 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 HP1BP3Q5SSJ5 553 aaPredicted RBP19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 APTXQ7Z2E3 356 aaKnown RBP19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 C7orf31Q8N865 590 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 AFG1LQ8WV93 481 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 PRPF31Q8WWY3 499 aaKnown RBP19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 MROH8Q9H579 483 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 SLC26A4O43511 780 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 TNFRSF8P28908 595 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 NCALDP61601 193 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 CDK17Q00537 523 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 GRIK3Q13003 919 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 RNF220Q5VTB9 566 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 IRF2BP1Q8IU81 584 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 GRAMD1AQ96CP6 724 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 OLFM3Q96PB7 478 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 SEMA4AQ9H3S1 761 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 AFG3L2Q9Y4W6 797 aa19.89■□□□□ 0.77
PPFIA1-202ENST00000389547 GOLGA8SH3BPF8 625 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 CYP26A1O43174 497 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 GH1P01241 217 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 ADORA2AP29274 412 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 PHKA2P46019 1235 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 MEI1Q5TIA1 1274 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 EXOC8Q8IYI6 725 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 BTBD7Q9P203 1132 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 MAGEA13PA6NCF6 341 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 SNX3O60493 162 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 PLA2G6O60733 806 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 SMNDC1O75940 238 aaKnown RBP eCLIP19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 LDHAP00338 332 aaKnown RBP19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 DNERQ8NFT8 737 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 RXFP1Q9HBX9 757 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 OLFML3Q9NRN5 406 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.88■□□□□ 0.774e-10■■■■□ 23.4
PPFIA1-202ENST00000389547 CHORDC1Q9UHD1 332 aaPredicted RBP19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 YBX3P16989 372 aaKnown RBP eCLIP19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 HSPA6P17066 643 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 EPC2Q52LR7 807 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 KLHL23Q8NBE8 558 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 RNPEPL1Q9HAU8 725 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 NDE1Q9NXR1 346 aa19.88■□□□□ 0.77
PPFIA1-202ENST00000389547 GSTA2P09210 222 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 UBA1P22314 1058 aaKnown RBP19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 CA8P35219 290 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 TRIM59Q8IWR1 403 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 STK32AQ8WU08 396 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 MIS12Q9H081 205 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 ZNF263O14978 683 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 PSMD6Q15008 389 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 EDEM3Q9BZQ6 932 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 ZNF214Q9UL59 606 aaPredicted RBP19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 STAM2O75886 525 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 CCNE2O96020 404 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 RFC1P35251 1148 aaPredicted RBP19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 FLT3P36888 993 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 KCNJ1P48048 391 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 PPIL2Q13356 520 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 C1orf146Q5VVC0 180 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 MAML1Q92585 1016 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 UBN1Q9NPG3 1134 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 RIPK1Q13546 671 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 LBX2Q6XYB7 198 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 RDM1Q8NG50 284 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 LRRC15Q8TF66 581 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 ITFG2Q969R8 447 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 LENG9Q96B70 501 aa19.87■□□□□ 0.77
PPFIA1-202ENST00000389547 TOPORSQ9NS56 1045 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms