RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 NPHP3-ACAD11A0A0J9YXS1 232 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 NFKBIAP25963 317 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 MRPS35P82673 323 aaKnown RBP15.19■□□□□ 0.02
PRDM16-203ENST00000378391 ATAD3BQ5T9A4 648 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 KRT73Q86Y46 540 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 MED15Q96RN5 788 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 EMC3Q9P0I2 261 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 SLC13A4Q9UKG4 626 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 ADCY3O60266 1144 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 KIAA1841Q6NSI8 718 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 C1orf228Q6PIY5 440 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 PID1Q7Z2X4 250 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 CDH24Q86UP0 819 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 MDM1Q8TC05 714 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 RAPGEF5Q92565 580 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 CELF4Q9BZC1 486 aaKnown RBP15.19■□□□□ 0.02
PRDM16-203ENST00000378391 KIF9Q9HAQ2 790 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 FSBPO95073 299 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 IFNA8P32881 189 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 KYNUQ16719 465 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 FASTKD1Q53R41 847 aaKnown RBP15.19■□□□□ 0.02
PRDM16-203ENST00000378391 CYFIP1Q7L576 1253 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 C4orf33Q8N1A6 199 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 SIKE1Q9BRV8 207 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 TLR10Q9BXR5 811 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 OSBPL8Q9BZF1 889 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 TUBA8Q9NY65 449 aaPredicted RBP15.19■□□□□ 0.02
PRDM16-203ENST00000378391 HERC5Q9UII4 1024 aaKnown RBP15.19■□□□□ 0.02
PRDM16-203ENST00000378391 MCM8Q9UJA3 840 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 TMCC1O94876 653 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 ALDH18A1P54886 795 aaKnown RBP15.19■□□□□ 0.02
PRDM16-203ENST00000378391 PIGHQ14442 188 aaPredicted RBP15.19■□□□□ 0.02
PRDM16-203ENST00000378391 MTBPQ96DY7 904 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 CCDC90BQ9GZT6 254 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 C1orf167Q5SNV9 1468 aa15.19■□□□□ 0.02
PRDM16-203ENST00000378391 AP3B1O00203 1094 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 P4HA2O15460 535 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 TRADDQ15628 312 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ZNF34Q8IZ26 560 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 THEM5Q8N1Q8 247 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 SLC30A5Q8TAD4 765 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 NR1H4Q96RI1 486 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 GINS4Q9BRT9 223 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 GDF3Q9NR23 364 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 TMEM247A6NEH6 219 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 WNT7AO00755 349 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 KLHL2O95198 593 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 COMTP21964 271 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 YWHABP31946 246 aaKnown RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 MAGEA4P43358 317 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 SLC29A2Q14542 456 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 SLC10A5Q5PT55 438 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 B4GALNT2Q8NHY0 566 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ULK4Q96C45 1275 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 QKIQ96PU8 341 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 A0A087X0T9 212 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 FAM228BP0C875 321 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 IREB2P48200 963 aaKnown RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 PRAMEP78395 509 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ZNF200P98182 395 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ELMSAN1Q6PJG2 1045 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ZNF662Q6ZS27 426 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ZC3H7BQ9UGR2 993 aaKnown RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 CAB39Q9Y376 341 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ANP32DO95626 131 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 PDHBP11177 359 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 SCTRP47872 440 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ARPP19P56211 112 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 NSUN2Q08J23 767 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 BARGINQ6ZT62 677 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 LRP10Q7Z4F1 713 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 PBXIP1Q96AQ6 731 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ASPSCR1Q9BZE9 553 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ASCC2Q9H1I8 757 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 EML4Q9HC35 981 aaKnown RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 SYTL2Q9HCH5 934 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ZMYND8Q9ULU4 1186 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 PCDHB2Q9Y5E7 798 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 LRRC37A3O60309 1634 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 EIF3DO15371 548 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRDM16-203ENST00000378391 DGAT1O75907 488 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 KYAT1Q16773 422 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 POTEAQ6S8J7 498 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ARHGEF26Q96DR7 871 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 SERPINB12Q96P63 405 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
PRDM16-203ENST00000378391 ADRA2BP18089 450 aa15.17■□□□□ 0.02
PRDM16-203ENST00000378391 CENPCQ03188 943 aa15.17■□□□□ 0.02
PRDM16-203ENST00000378391 CAPRIN1Q14444 709 aaKnown RBP15.17■□□□□ 0.02
PRDM16-203ENST00000378391 IL17AQ16552 155 aa15.17■□□□□ 0.02
PRDM16-203ENST00000378391 LRRC8EQ6NSJ5 796 aa15.17■□□□□ 0.02
PRDM16-203ENST00000378391 PABPC3Q9H361 631 aaKnown RBP15.17■□□□□ 0.02
PRDM16-203ENST00000378391 DDX20Q9UHI6 824 aaKnown RBP15.17■□□□□ 0.02
PRDM16-203ENST00000378391 NFX1Q12986 1120 aaKnown RBP15.17■□□□□ 0.02
PRDM16-203ENST00000378391 IMPG1Q17R60 797 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms