RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PPM1NQ8N819 430 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 NCAPGQ9BPX3 1015 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 MTFR1LQ9H019 292 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 SIK2Q9H0K1 926 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 CDC42EP4Q9H3Q1 356 aaKnown RBP12.33□□□□□ -0.44
DDR1-227ENST00000376570 RNPEPQ9H4A4 650 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 KIF9Q9HAQ2 790 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 FIS1Q9Y3D6 152 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.44
DDR1-227ENST00000376570 MIF4GDA9UHW6 222 aaKnown RBP12.33□□□□□ -0.44
DDR1-227ENST00000376570 HMGB1P1B2RPK0 211 aaPredicted RBP12.33□□□□□ -0.44
DDR1-227ENST00000376570 HCRTO43612 131 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 ARIH2O95376 493 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 NFICP08651 508 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 CHRNA3P32297 505 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 MMRN1Q13201 1228 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 TFDP1Q14186 410 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 RCN2Q14257 317 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 TXNRD3NBQ6F5E7 133 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 RAPGEF5Q92565 580 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 GMLQ99445 158 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 UNKQ9C0B0 810 aaKnown RBP12.33□□□□□ -0.44
DDR1-227ENST00000376570 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 GOLGA2P5Q9HBQ8 144 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 TXNRD2Q9NNW7 524 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 ZNF214Q9UL59 606 aaPredicted RBP12.33□□□□□ -0.44
DDR1-227ENST00000376570 DNPEPQ9ULA0 475 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 PTPRJQ12913 1337 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 TNRC6CQ9HCJ0 1690 aaKnown RBP12.33□□□□□ -0.44
DDR1-227ENST00000376570 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 CHD4Q14839 1912 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 SDK1Q7Z5N4 2213 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 A0A0G2JND7 137 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 HSD17B4P51659 736 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 CCDC6Q16204 474 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 TAOK1Q7L7X3 1001 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 FMNL3Q8IVF7 1028 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 SCUBE3Q8IX30 993 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 HACE1Q8IYU2 909 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 KLC4Q9NSK0 619 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
DDR1-227ENST00000376570 MYH1P12882 1939 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 TMEM120BA0PK00 339 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 APRTP07741 180 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 MYBL1P10243 752 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 ARL1P40616 181 aaPredicted RBP12.32□□□□□ -0.44
DDR1-227ENST00000376570 ALCAMQ13740 583 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 TAF5Q15542 800 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 SLC39A4Q6P5W5 647 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 CATSPERGQ6ZRH7 1159 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 LRRC34Q8IZ02 419 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 FBF1Q8TES7 1133 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 GPRASP2Q96D09 838 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 APOBEC3GQ9HC16 384 aaKnown RBP12.32□□□□□ -0.44
DDR1-227ENST00000376570 NUDT5Q9UKK9 219 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 CHRNB2P17787 502 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 KCNA3P22001 575 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 ABCG1P45844 678 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 DNAJC3Q13217 504 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 FAF2Q96CS3 445 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 NSRP1Q9H0G5 558 aaKnown RBP12.32□□□□□ -0.44
DDR1-227ENST00000376570 CARD9Q9H257 536 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 HOMER3Q9NSC5 361 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 MYH11P35749 1972 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 C6orf222P0C671 652 aaPredicted RBP12.32□□□□□ -0.44
DDR1-227ENST00000376570 KCNA2P16389 499 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 SESN2P58004 480 aaPredicted RBP12.32□□□□□ -0.44
DDR1-227ENST00000376570 MYO1EQ12965 1108 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 SEMA3FQ13275 785 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 MAP4K3Q8IVH8 894 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 CCDC197Q8NCU1 140 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 APOL2Q9BQE5 337 aa12.32□□□□□ -0.44
DDR1-227ENST00000376570 BTAF1O14981 1849 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 PLIN4Q96Q06 1357 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 I3L4J1 428 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 MOCS2O96007 188 aaPredicted RBP12.31□□□□□ -0.44
DDR1-227ENST00000376570 MAPTP10636 758 aaKnown RBP12.31□□□□□ -0.44
DDR1-227ENST00000376570 GTF2BQ00403 316 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 LRRC57Q8N9N7 239 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 OR6J1Q8NGC5 347 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 USP33Q8TEY7 942 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 TEPSINQ96N21 525 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 FAM167BQ9BTA0 163 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDR1-227ENST00000376570 TXNDC16Q9P2K2 825 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 RGS20O76081 388 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 STAG3L1P0CL83 205 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 SSTR1P30872 391 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 RFC1P35251 1148 aaPredicted RBP12.31□□□□□ -0.44
DDR1-227ENST00000376570 QPCTQ16769 361 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms