RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SENP8Q96LD8 212 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 DNAJC7Q99615 494 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 ARID3AQ99856 593 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 AAASQ9NRG9 546 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 ABHD10Q9NUJ1 306 aa24.54■■□□□ 1.52
HLA-C-202ENST00000376237 PRG3Q9Y2Y8 225 aaPredicted RBP24.54■■□□□ 1.52
HLA-C-202ENST00000376237 FOXN3O00409 490 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-202ENST00000376237 CYB561D2O14569 222 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 TACC1O75410 805 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 PTMAP06454 111 aaKnown RBP24.53■■□□□ 1.52
HLA-C-202ENST00000376237 HNRNPH3P31942 346 aaKnown RBP24.53■■□□□ 1.52
HLA-C-202ENST00000376237 SOX5P35711 763 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 SFMBT2Q5VUG0 894 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 CD300LGQ6UXG3 332 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 LIMS2Q7Z4I7 341 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 FIBCD1Q8N539 461 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 SP7Q8TDD2 431 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-202ENST00000376237 SUSD3Q96L08 255 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 PANX2Q96RD6 677 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 GPR88Q9GZN0 384 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 CISHQ9NSE2 258 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 ZNHIT6Q9NWK9 470 aaKnown RBP24.53■■□□□ 1.52
HLA-C-202ENST00000376237 AIPL1Q9NZN9 384 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 ADAM28Q9UKQ2 775 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 CNTN6Q9UQ52 1028 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 COL4A6Q14031 1691 aa24.53■■□□□ 1.52
HLA-C-202ENST00000376237 WEE2P0C1S8 567 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 ACO1P21399 889 aaKnown RBP24.52■■□□□ 1.52
HLA-C-202ENST00000376237 SOWAHAQ2M3V2 549 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 TIGD5Q53EQ6 642 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 KCNT2Q6UVM3 1135 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 SCARA5Q6ZMJ2 495 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 FAM71AQ8IYT1 594 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 TMEM86AQ8N2M4 240 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 SPATA18Q8TC71 538 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 ZNF558Q96NG5 402 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 HCSTQ9UBK5 93 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 DSEQ9UL01 958 aa24.52■■□□□ 1.52
HLA-C-202ENST00000376237 MRPL42Q9Y6G3 142 aaKnown RBP24.52■■□□□ 1.52
HLA-C-202ENST00000376237 M0QZQ0 153 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 ODC1P11926 461 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 FERP16591 822 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 BMP8BP34820 402 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 INCA1Q0VD86 236 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 ELAVL2Q12926 359 aaKnown RBP24.51■■□□□ 1.51
HLA-C-202ENST00000376237 UBR7Q8N806 425 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 SMYD3Q9H7B4 428 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 CDH8P55286 799 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 DNAI2Q9GZS0 605 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 SDCBP2Q9H190 292 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 BARX2Q9UMQ3 279 aaPredicted RBP24.51■■□□□ 1.51
HLA-C-202ENST00000376237 PCDHB4Q9Y5E5 795 aa24.51■■□□□ 1.51
HLA-C-202ENST00000376237 SCN1AP35498 2009 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 SF3B1O75533 1304 aaKnown RBP eCLIP24.5■■□□□ 1.51
HLA-C-202ENST00000376237 CYP11A1P05108 521 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 ITGB1P05556 798 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 CD58P19256 250 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 IGFBP6P24592 240 aaPredicted RBP24.5■■□□□ 1.51
HLA-C-202ENST00000376237 BRCC3P46736 316 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 BPIFB4P59827 614 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 UNC93AQ86WB7 457 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 HASPINQ8TF76 798 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 CLP1Q92989 425 aaKnown RBP24.5■■□□□ 1.51
HLA-C-202ENST00000376237 MARCH5Q9NX47 278 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 L1RE1Q9UN81 338 aa24.5■■□□□ 1.51
HLA-C-202ENST00000376237 SYN3O14994 580 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 CILPO75339 1184 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 KRT5P13647 590 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 TYMPP19971 482 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 WARSP23381 471 aaKnown RBP24.49■■□□□ 1.51
HLA-C-202ENST00000376237 PPM1AP35813 382 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 USP8P40818 1118 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 ASIC2Q16515 512 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 TMEM270Q6UE05 265 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 METTL23Q86XA0 190 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 ADGRF2Q8IZF7 708 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 PDCL2Q8N4E4 241 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 COLGALT1Q8NBJ5 622 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 STK39Q9UEW8 545 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 PCDHB8Q9UN66 801 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 PCDHB12Q9Y5F1 795 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 BZW2Q9Y6E2 419 aaKnown RBP24.49■■□□□ 1.51
HLA-C-202ENST00000376237 PTPRSQ13332 1948 aa24.49■■□□□ 1.51
HLA-C-202ENST00000376237 NT5C1B-RDH14C9J2C7 533 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 F8W810 466 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 GFPT2O94808 682 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 RAP1GAPP47736 663 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 LHX1P48742 406 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 GOLGA8FQ08AF8 430 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 GOLGA8DPQ0D2H9 430 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 MEA1Q16626 185 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 IRF2BP2Q7Z5L9 587 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 IGSF21Q96ID5 467 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 MRPL45Q9BRJ2 306 aaKnown RBP24.48■■□□□ 1.51
HLA-C-202ENST00000376237 SNX25Q9H3E2 840 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 SPG21Q9NZD8 308 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 RWDD3Q9Y3V2 267 aa24.48■■□□□ 1.51
HLA-C-202ENST00000376237 GABRDO14764 452 aa24.47■■□□□ 1.51
HLA-C-202ENST00000376237 NRDCO43847 1150 aa24.47■■□□□ 1.51
HLA-C-202ENST00000376237 GNL1P36915 607 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms