RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TNIP3Q96KP6 325 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 APOL1O14791 398 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 RGS2P41220 211 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 NPEPPSP55786 919 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 NLRP11P59045 1033 aaKnown RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 SBK1Q52WX2 424 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 MXRA8Q9BRK3 442 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 NPHS2Q9NP85 383 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 PTPRUQ92729 1446 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ZNF197O14709 1029 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 DGAT1O75907 488 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 CCDC15Q0P6D6 951 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 C6orf10Q5SRN2 563 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ATF7IP2Q5U623 682 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.01
TRAF1-201ENST00000373887 KCNH7Q9NS40 1196 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 MARCOQ9UEW3 520 aaPredicted RBP15□□□□□ -0.01
TRAF1-201ENST00000373887 AK9Q5TCS8 1911 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ADGRA2Q96PE1 1338 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ADM5C9JUS6 153 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 CCDC157Q569K6 752 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 LRRC8BQ6P9F7 803 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ARHGAP18Q8N392 663 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 FAM162AQ96A26 154 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ELMO2Q96JJ3 720 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 C6orf203Q9P0P8 240 aaPredicted RBP15□□□□□ -0.01
TRAF1-201ENST00000373887 YY1P25490 414 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 CDK17Q00537 523 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 GLB1LQ6UWU2 654 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ATP6V1G3Q96LB4 118 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 PHF20Q9BVI0 1012 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ERAP1Q9NZ08 941 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 BFARQ9NZS9 450 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 FKBP9O95302 570 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 KRT7P08729 469 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 PDAP1Q13442 181 aaKnown RBP15□□□□□ -0.01
TRAF1-201ENST00000373887 FKBP9P1Q75LS8 142 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 IFNEQ86WN2 208 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 FMR1NBQ8N0W7 255 aaPredicted RBP15□□□□□ -0.01
TRAF1-201ENST00000373887 CHMP1BQ7LBR1 199 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 SH3GL3Q99963 347 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 MUC3BQ9H195 1237 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 ZNF556Q9HAH1 456 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 KLC4Q9NSK0 619 aa15□□□□□ -0.01
TRAF1-201ENST00000373887 GEMIN8Q9NWZ8 242 aaKnown RBP15□□□□□ -0.01
TRAF1-201ENST00000373887 FAM32AQ9Y421 112 aaKnown RBP15□□□□□ -0.01
TRAF1-201ENST00000373887 KCNN4O15554 427 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 PLEKHH3Q7Z736 793 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 UBA3Q8TBC4 463 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 HASPINQ8TF76 798 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 GLIS2Q9BZE0 524 aaPredicted RBP14.99□□□□□ -0.01
TRAF1-201ENST00000373887 ALDH1A1P00352 501 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 CAP2P40123 477 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 TXNRD3Q86VQ6 643 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 RAB42Q8N4Z0 105 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 CHST13Q8NET6 341 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 SH3GL2Q99962 352 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 TAF1DQ9H5J8 278 aaPredicted RBP14.99□□□□□ -0.01
TRAF1-201ENST00000373887 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.99□□□□□ -0.01
TRAF1-201ENST00000373887 H2AFY2Q9P0M6 372 aaPredicted RBP14.99□□□□□ -0.01
TRAF1-201ENST00000373887 C17orf80Q9BSJ5 609 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 PI4K2AQ9BTU6 479 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 IL1RL2Q9HB29 575 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 CACNA2D2Q9NY47 1150 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 KRT75O95678 551 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 WEE2P0C1S8 567 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 MLH1P40692 756 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 RCAN1P53805 252 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 BTKQ06187 659 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 SCFD2Q8WU76 684 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 ZCCHC17Q9NP64 241 aaKnown RBP14.99□□□□□ -0.01
TRAF1-201ENST00000373887 TSC22D4Q9Y3Q8 395 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 GPR75-ASB3A0A0A6YYF3 556 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 VTNP04004 478 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 TPI1P60174 286 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 ORC1Q13415 861 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 TMEM245Q9H330 911 aa14.99□□□□□ -0.01
TRAF1-201ENST00000373887 DDX56Q9NY93 547 aaKnown RBP14.99□□□□□ -0.01
TRAF1-201ENST00000373887 CYTH3O43739 400 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 HSPA9P38646 679 aaKnown RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 RBP5P82980 135 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 IYDQ6PHW0 289 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 C11orf96Q7Z7L8 435 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 PLEKHA8Q96JA3 519 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 CAPN10Q9HC96 672 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 PRR23AA6NEV1 266 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 XPO1O14980 1071 aaKnown RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 SOAT1P35610 550 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 EIF3EP60228 445 aaKnown RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 NCOA4Q13772 614 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 IL31Q6EBC2 164 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 ARMC2Q8NEN0 867 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 STMN3Q9NZ72 180 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 DGKIO75912 1065 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 ST8SIA6P61647 398 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 EXOSC10Q01780 885 aaKnown RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 CXCL9Q07325 125 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms