RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 TMEM110-MUSTN1A8MSY1 372 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 MYBL1P10243 752 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 RRM1P23921 792 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 CST5P28325 142 aaPredicted RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 HOXD10P28358 340 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 RNASE9P60153 205 aaKnown RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 MESDQ14696 234 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 PHF13Q86YI8 300 aaPredicted RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 TRIM11Q96F44 468 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 APOL6Q9BWW8 343 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 RBM12Q9NTZ6 932 aaKnown RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 ARGLU1Q9NWB6 273 aaPredicted RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 ZNF446Q9NWS9 450 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 CNTN3Q9P232 1028 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 RALGAPA2Q2PPJ7 1873 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 CEP104O60308 925 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 STAU1O95793 577 aaKnown RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 HMGCRP04035 888 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 RAD23BP54727 409 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 PTP4A2Q12974 167 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 PHLDB2Q86SQ0 1253 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 ACTRT1Q8TDG2 376 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 WHAMMQ8TF30 809 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 C18orf25Q96B23 403 aaPredicted RBP16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 SELENOOQ9BVL4 669 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 CYP3A43Q9HB55 503 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 TRPV2Q9Y5S1 764 aa16.6■□□□□ 0.25
GTF3C5-204ENST00000372108 CHRNA1P02708 482 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 COMTP21964 271 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 GLRA4Q5JXX5 417 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 DCAF12L1Q5VU92 463 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 SESTD1Q86VW0 696 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 RASGEF1CQ8N431 466 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 VCPIP1Q96JH7 1222 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 RPS6KC1Q96S38 1066 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 RNF19AQ9NV58 838 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 ADAM22Q9P0K1 906 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 TUBGCP4Q9UGJ1 667 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 HMGXB4Q9UGU5 601 aa16.59■□□□□ 0.25
GTF3C5-204ENST00000372108 M0QZ92 97 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 CILPO75339 1184 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 P4HA1P13674 534 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 MAP2K2P36507 400 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 RSPH3Q86UC2 560 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 CPNE8Q86YQ8 564 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 SMG8Q8ND04 991 aaKnown RBP16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 TWNKQ96RR1 684 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 C11orf70Q9BRQ4 267 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 ELOVL4Q9GZR5 314 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 PCDHGC3Q9UN70 934 aa16.58■□□□□ 0.25
GTF3C5-204ENST00000372108 PPEF2O14830 753 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 LSM8O95777 96 aaKnown RBP16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 PAEPP09466 180 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 VEGFBP49765 207 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 VSNL1P62760 191 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 ORC1Q13415 861 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 XKR4Q5GH76 650 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 RPAINQ86UA6 219 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 WDTC1Q8N5D0 677 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 SLC4A11Q8NBS3 891 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 ALG3Q92685 438 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 CD101Q93033 1021 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 TRIM7Q9C029 511 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 KLK14Q9P0G3 267 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 DDX20Q9UHI6 824 aaKnown RBP16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 TMEM59LQ9UK28 342 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 IPPQ9Y573 584 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 THSD7BQ9C0I4 1608 aa16.58■□□□□ 0.24
GTF3C5-204ENST00000372108 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 TARSL2A2RTX5 802 aaKnown RBP16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 CTSHP09668 335 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 MMP8P22894 467 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 BRD3Q15059 726 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 LIN9Q5TKA1 542 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 PPP1R2P3Q6NXS1 205 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 WDR93Q6P2C0 686 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 BEST2Q8NFU1 509 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 RAET1EQ8TD07 263 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.57■□□□□ 0.246e-7■□□□□ 9.6
GTF3C5-204ENST00000372108 LRRC1Q9BTT6 524 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 PARP2Q9UGN5 583 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 ANAPC7Q9UJX3 599 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 ST3GAL5Q9UNP4 418 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 CCDC151A5D8V7 595 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 MIF4GDA9UHW6 222 aaKnown RBP16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 CD19P15391 556 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 TNNC1P63316 161 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 MGAT3Q09327 533 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 MYO1EQ12965 1108 aa16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
GTF3C5-204ENST00000372108 PCSK9Q8NBP7 692 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms