RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CASP5P51878 434 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 NEDD8Q15843 81 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 C1orf228Q6PIY5 440 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF624Q9P2J8 865 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ATP10DQ9P241 1426 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 HPCAP84074 193 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 WASHC2DQ5SRD0 308 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ARID3BQ8IVW6 561 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 UBXN6Q9BZV1 441 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 WBP11Q9Y2W2 641 aaKnown RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 RTN2O75298 545 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 SLC34A1Q06495 639 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 TSNQ15631 228 aaKnown RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 THEMIS2Q5TEJ8 643 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 CHMP1BQ7LBR1 199 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 SUN5Q8TC36 379 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ILKAPQ9H0C8 392 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ZFP1Q6P2D0 407 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ARHGEF26Q96DR7 871 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 PACSIN1Q9BY11 444 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 MLNP12872 115 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 IFNAR1P17181 557 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 SDC4P31431 198 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 NDUFAF6Q330K2 333 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 MZT2BQ6NZ67 158 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 C16orf62Q7Z3J2 963 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 FMR1NBQ8N0W7 255 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 CDHR2Q9BYE9 1310 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 PTPN4P29074 926 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 CDH6P55285 790 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 EFL1Q7Z2Z2 1120 aaKnown RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 RCOR2Q8IZ40 523 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 PTPRN2Q92932 1015 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ZBTB1Q9Y2K1 713 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 VIL1P09327 827 aaKnown RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF667Q5HYK9 610 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 CCDC33Q8N5R6 958 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 BDH2Q9BUT1 245 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 KIAA1586Q9HCI6 787 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 RPRD1BQ9NQG5 326 aaKnown RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.92■□□□□ 0.14
COL5A1-201ENST00000371817 RAD51CO43502 376 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 TGFBR2P37173 567 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 STARP49675 285 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 ATG14Q6ZNE5 492 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 LRRC34Q8IZ02 419 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 PCSK1NQ9UHG2 260 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 STOML2Q9UJZ1 356 aa15.92■□□□□ 0.14
COL5A1-201ENST00000371817 CHL1O00533 1208 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 EFHC1Q5JVL4 640 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 TTC27Q6P3X3 843 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 ZCWPW1Q9H0M4 648 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 SP110Q9HB58 689 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL5A1-201ENST00000371817 NCKAP1LP55160 1127 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 CTSWP56202 376 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 RASA2Q15283 850 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 CDHR1Q96JP9 859 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 PRRG3Q9BZD7 231 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 RIC8BQ9NVN3 520 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 VWA5AO00534 786 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 GEMIN4P57678 1058 aaKnown RBP15.91■□□□□ 0.14
COL5A1-201ENST00000371817 SLC18A3Q16572 532 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 ENOSF1Q7L5Y1 443 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 CYP21A2P08686 494 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 RAD23AP54725 363 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 NR1D2Q14995 579 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 RUNDC3AQ59EK9 446 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 MFSD14BQ5SR56 506 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 SH3KBP1Q96B97 665 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 ERP44Q9BS26 406 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 THUMPD3Q9BV44 507 aaKnown RBP15.91■□□□□ 0.14
COL5A1-201ENST00000371817 IL2RBP14784 551 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 TRAF2Q12933 501 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 IRGCQ6NXR0 463 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 ZBTB33Q86T24 672 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 HPS4Q9NQG7 708 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 UTYO14607 1347 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 A0A087WXM4 84 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 MEI4A8MW99 385 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 NLRP10Q86W26 655 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 C11orf70Q9BRQ4 267 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 PAGR1Q9BTK6 254 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 AS3MTQ9HBK9 375 aa15.91■□□□□ 0.14
COL5A1-201ENST00000371817 POLR1AO95602 1720 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-201ENST00000371817 CASP4P49662 377 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 EXOSC10Q01780 885 aaKnown RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 BNC1Q01954 994 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 RNF219Q5W0B1 726 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 IZUMO1Q8IYV9 350 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ING4Q9UNL4 249 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 CARD8Q9Y2G2 431 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 EFCAB10A6NFE3 127 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ICA1Q05084 483 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ZMYM1Q5SVZ6 1142 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms