RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 TSPAN17Q96FV3 270 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 NARS2Q96I59 477 aaKnown RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 RBM12Q9NTZ6 932 aaKnown RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 CHORDC1Q9UHD1 332 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 ATP6V1HQ9UI12 483 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 IQCA1LA6NCM1 817 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 ZBTB5O15062 677 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 RAD51CO43502 376 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 CLASP2O75122 1294 aaKnown RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 PFKFB3Q16875 520 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 USP39Q53GS9 565 aaKnown RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 RSBN1Q5VWQ0 802 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 ARHGEF26Q96DR7 871 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 CYP2C19P33261 490 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 CENPLQ8N0S6 344 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 MCPH1Q8NEM0 835 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 TNIP2Q8NFZ5 429 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 SH2D3AQ9BRG2 576 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 DAPK2Q9UIK4 370 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 PTPRKQ15262 1439 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 F8W810 466 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 SKAP2O75563 359 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 RAD51Q06609 339 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 SNRNP48Q6IEG0 339 aaKnown RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 KLHL17Q6TDP4 642 aa11.6□□□□□ -0.55
COL11A1-203ENST00000370096 UTP6Q9NYH9 597 aaKnown RBP11.6□□□□□ -0.55
COL11A1-203ENST00000370096 UHRF1BP1Q6BDS2 1440 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 EVPLLA8MZ36 301 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 KRT16P08779 473 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 MYBP10242 640 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 NMT1P30419 496 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 KLK7P49862 253 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 TWF1Q12792 350 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 DNAJC3Q13217 504 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 AASDHQ4L235 1098 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 PGBD3Q8N328 593 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 SH3TC2Q8TF17 1288 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 ROGDIQ9GZN7 287 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 GPATCH8Q9UKJ3 1502 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 MLH3Q9UHC1 1453 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 KRT78Q8N1N4 520 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 HIC2Q96JB3 615 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 SPATA33Q96N06 139 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 POLG2Q9UHN1 485 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 PSMC3P17980 439 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 IREB2P48200 963 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 MRPS35P82673 323 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 CSTF3Q12996 717 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 LAMB3Q13751 1172 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 RASGRF1Q13972 1273 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 FAM129AQ9BZQ8 928 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 OSBPL5Q9H0X9 879 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 SLC39A10Q9ULF5 831 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 LOC102724428A0A0B4J2F2 783 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 NDUFB5O43674 189 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 CHRM3P20309 590 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 PSMA4P25789 261 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 SIK1P57059 783 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 TAP1Q03518 808 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 ZSWIM7Q19AV6 140 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 DGKKQ5KSL6 1271 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 UBASH3BQ8TF42 649 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 EEF2KO00418 725 aaKnown RBP11.59□□□□□ -0.55
COL11A1-203ENST00000370096 FYNP06241 537 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 GSTM1P09488 218 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 ITGA8P53708 1063 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 NECTIN1Q15223 517 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 RCSD1Q6JBY9 416 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 CCDC33Q8N5R6 958 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 ZNF614Q8N883 585 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 E2F7Q96AV8 911 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 APPL1Q9UKG1 709 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 SNX13Q9Y5W8 968 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 ERBB3P21860 1342 aa11.59□□□□□ -0.55
COL11A1-203ENST00000370096 ATP6V1B2P21281 511 aa11.58□□□□□ -0.55
COL11A1-203ENST00000370096 C12orf60Q5U649 245 aa11.58□□□□□ -0.55
COL11A1-203ENST00000370096 NAIF1Q69YI7 327 aaPredicted RBP11.58□□□□□ -0.55
COL11A1-203ENST00000370096 LRIG3Q6UXM1 1119 aa11.58□□□□□ -0.55
COL11A1-203ENST00000370096 TFR2Q9UP52 801 aa11.58□□□□□ -0.55
COL11A1-203ENST00000370096 E9PBE3 544 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 TDP2O95551 362 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 MAGEA4P43358 317 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 PRIM2P49643 509 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 ACOT2P49753 483 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 MAPK10P53779 464 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 TRIM72Q6ZMU5 477 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 MXD3Q9BW11 206 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 TK2O00142 265 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 TRIM24O15164 1050 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 AP3B2Q13367 1082 aa11.58□□□□□ -0.56
COL11A1-203ENST00000370096 DDX39BQ13838 428 aaKnown RBP11.58□□□□□ -0.56
COL11A1-203ENST00000370096 FAM136AQ96C01 138 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms