RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ACOT1Q86TX2 421 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 SLC25A41Q8N5S1 370 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 ACSF2Q96CM8 615 aaPredicted RBP19.5■□□□□ 0.71
CLIP2-202ENST00000361545 DDX27Q96GQ7 796 aaKnown RBP19.5■□□□□ 0.71
CLIP2-202ENST00000361545 CXCL11O14625 94 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 PTPAQ15257 358 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 DPF3Q92784 378 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 CDCA5Q96FF9 252 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 GOLPH3Q9H4A6 298 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 SYNDIG1Q9H7V2 258 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 GOLGA8RI6L899 631 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 PPFIA2O75334 1257 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 NAA30Q147X3 362 aaPredicted RBP19.5■□□□□ 0.71
CLIP2-202ENST00000361545 COBLL1Q53SF7 1204 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 GIPC2Q8TF65 315 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 UPF3AQ9H1J1 476 aaKnown RBP19.5■□□□□ 0.71
CLIP2-202ENST00000361545 WTIPA6NIX2 430 aaPredicted RBP19.49■□□□□ 0.71
CLIP2-202ENST00000361545 PLSCR1O15162 318 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 AP1G2O75843 785 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 TOB1P50616 345 aaPredicted RBP19.49■□□□□ 0.71
CLIP2-202ENST00000361545 BTBD6Q96KE9 485 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 YME1L1Q96TA2 773 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 ALG13Q9NP73 1137 aaKnown RBP19.49■□□□□ 0.71
CLIP2-202ENST00000361545 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 GYPCP04921 128 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 GIT2Q14161 759 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 DDIASQ8IXT1 998 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 SPATA18Q8TC71 538 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 POP1Q99575 1024 aaKnown RBP19.49■□□□□ 0.71
CLIP2-202ENST00000361545 ASCC2Q9H1I8 757 aaPredicted RBP19.49■□□□□ 0.71
CLIP2-202ENST00000361545 TMCC1O94876 653 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 CYP2W1Q8TAV3 490 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 OSBPL8Q9BZF1 889 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 SLC7A5P2Q9GIP4 190 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 SYNDIG1LA6NDD5 238 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 MANSC4A6NHS7 340 aaPredicted RBP19.49■□□□□ 0.71
CLIP2-202ENST00000361545 Q4G0T1 1027 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 CATSPERBQ9H7T0 1116 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 SMARCAL1Q9NZC9 954 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 PCDHB8Q9UN66 801 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 KIAA1210Q9ULL0 1709 aa19.49■□□□□ 0.71
CLIP2-202ENST00000361545 CST8O60676 142 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 C2CD6Q53TS8 623 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 RAD9BQ6WBX8 426 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 ARHGEF26Q96DR7 871 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 L3MBTL1Q9Y468 752 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 ARHGEF7Q14155 803 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 BEND6Q5SZJ8 279 aaPredicted RBP19.48■□□□□ 0.71
CLIP2-202ENST00000361545 HIBCHQ6NVY1 386 aaPredicted RBP19.48■□□□□ 0.71
CLIP2-202ENST00000361545 MIB1Q86YT6 1006 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 DNERQ8NFT8 737 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 EXOC4Q96A65 974 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 SPECC1L-ADORA2AF8WAN1 911 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 CYB561D2O14569 222 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 DCTN3O75935 186 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 GFAPP14136 432 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 ADORA2AP29274 412 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 MORF4L2Q15014 288 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 E2F5Q15329 346 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 MAPRE1Q15691 268 aaKnown RBP19.48■□□□□ 0.71
CLIP2-202ENST00000361545 FSCBQ5H9T9 825 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 TC2NQ8N9U0 490 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 CASS4Q9NQ75 786 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 DDIT4Q9NX09 232 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 TRPA1O75762 1119 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 INSRRP14616 1297 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 PHEXP78562 749 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 SYTL3Q4VX76 610 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 IPMKQ8NFU5 416 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 FEZF2Q8TBJ5 459 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 XPO7Q9UIA9 1087 aaKnown RBP19.48■□□□□ 0.71
CLIP2-202ENST00000361545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.48■□□□□ 0.71
CLIP2-202ENST00000361545 SLC30A1Q9Y6M5 507 aa19.48■□□□□ 0.71
CLIP2-202ENST00000361545 GTF2H3Q13889 308 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 BYSLQ13895 437 aaKnown RBP19.47■□□□□ 0.71
CLIP2-202ENST00000361545 ENTPD7Q9NQZ7 604 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 ALG6Q9Y672 507 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 SLC4A7Q9Y6M7 1214 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 PHF2O75151 1096 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 EPHB2P29323 1055 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 NUMBP49757 651 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 ARHGAP15Q53QZ3 475 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 SAMD3Q8N6K7 520 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 DACT3Q96B18 629 aaPredicted RBP19.47■□□□□ 0.71
CLIP2-202ENST00000361545 SLC4A9Q96Q91 983 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 ZC3H7BQ9UGR2 993 aaKnown RBP19.47■□□□□ 0.71
CLIP2-202ENST00000361545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.47■□□□□ 0.71
CLIP2-202ENST00000361545 M0QYT0 321 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 TLR2O60603 784 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 PQBP1O60828 265 aaKnown RBP19.47■□□□□ 0.71
CLIP2-202ENST00000361545 KCNA2P16389 499 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 ZNF677Q86XU0 584 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 SEPT8Q92599 483 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 RBM15Q96T37 977 aaKnown RBP eCLIP19.47■□□□□ 0.718e-6■■■■■ 30.1
CLIP2-202ENST00000361545 CYTH2Q99418 400 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 TMEM131LA2VDJ0 1609 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 TMEM253P0C7T8 217 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 MDM2Q00987 491 aaPredicted RBP19.47■□□□□ 0.71
CLIP2-202ENST00000361545 PTF1AQ7RTS3 328 aa19.47■□□□□ 0.71
CLIP2-202ENST00000361545 C9orf72Q96LT7 481 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms