RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.34■□□□□ 0.21
TPM1-206ENST00000358278 VPS52Q8N1B4 723 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 ERGIC2Q96RQ1 377 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 LSM14BQ9BX40 385 aaKnown RBP16.34■□□□□ 0.21
TPM1-206ENST00000358278 VN1R3Q9BXE9 311 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 ZNF576Q9H609 170 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 PCDHB8Q9UN66 801 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 H3BNC9 293 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 SYN3O14994 580 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 CSPG5O95196 566 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 UBE3AQ05086 875 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 KCNMA1Q12791 1236 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 NR1I3Q14994 352 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 SARM1Q6SZW1 724 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 TOP6BLQ8N6T0 577 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 TATDN2Q93075 761 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 B3GALT6Q96L58 329 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 TTPALQ9BTX7 342 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 HERC2P3Q9BVR0 1158 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 SMYD3Q9H7B4 428 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 DSEQ9UL01 958 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 L1RE1Q9UN81 338 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 LZTS1Q9Y250 596 aa16.33■□□□□ 0.21
TPM1-206ENST00000358278 TIMM13Q9Y5L4 95 aaPredicted RBP16.33■□□□□ 0.21
TPM1-206ENST00000358278 GOLGA6L3A6NEY3 463 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 SOX1O00570 391 aaPredicted RBP16.33■□□□□ 0.2
TPM1-206ENST00000358278 URODP06132 367 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 TBXAS1P24557 533 aaPredicted RBP16.33■□□□□ 0.2
TPM1-206ENST00000358278 CA8P35219 290 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 ASPAP45381 313 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 YWHAHQ04917 246 aaPredicted RBP16.33■□□□□ 0.2
TPM1-206ENST00000358278 PTPN21Q16825 1174 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 METTL23Q86XA0 190 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 RNF168Q8IYW5 571 aaPredicted RBP16.33■□□□□ 0.2
TPM1-206ENST00000358278 ADGRF2Q8IZF7 708 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 SPPL3Q8TCT6 385 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 GDPD5Q8WTR4 605 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 POF1BQ8WVV4 589 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 ENTPD7Q9NQZ7 604 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 FAM207AQ9NSI2 230 aaPredicted RBP16.33■□□□□ 0.2
TPM1-206ENST00000358278 SIK3Q9Y2K2 1263 aa16.33■□□□□ 0.2
TPM1-206ENST00000358278 REV3LO60673 3130 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 TMEM265A0A087WTH1 108 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 C2CD2LO14523 706 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 GRM6O15303 877 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 EFEMP2O95967 443 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 TYMPP19971 482 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 FGFR3P22607 806 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 GLUD2P49448 558 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 KLK7P49862 253 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 APBA1Q02410 837 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 CUL2Q13617 745 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 BMS1Q14692 1282 aaKnown RBP16.32■□□□□ 0.2
TPM1-206ENST00000358278 SOWAHAQ2M3V2 549 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 RTP2Q5QGT7 225 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 WSCD1Q658N2 575 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 OVOS1Q6IE37 1185 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 RRAGAQ7L523 313 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 DPH6Q7L8W6 267 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 ARHGEF19Q8IW93 802 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 TMEM86AQ8N2M4 240 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 LRCH3Q96II8 777 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 ARID3AQ99856 593 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 BCO2Q9BYV7 579 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 UBE2TQ9NPD8 197 aaPredicted RBP16.32■□□□□ 0.2
TPM1-206ENST00000358278 TLR9Q9NR96 1032 aa16.32■□□□□ 0.2
TPM1-206ENST00000358278 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 CYP11A1P05108 521 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 WEE2P0C1S8 567 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 GCNT1Q02742 428 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
TPM1-206ENST00000358278 ZNF697Q5TEC3 545 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 PHLDB3Q6NSJ2 640 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 TMC7Q7Z402 723 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 NEK11Q8NG66 645 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 RIN2Q8WYP3 895 aaPredicted RBP16.31■□□□□ 0.2
TPM1-206ENST00000358278 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 TCF25Q9BQ70 676 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 ZBP1Q9H171 429 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 SIX2Q9NPC8 291 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 PLCB1Q9NQ66 1216 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 MRPL17Q9NRX2 175 aaKnown RBP16.31■□□□□ 0.2
TPM1-206ENST00000358278 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 MTCL1Q9Y4B5 1905 aaKnown RBP16.31■□□□□ 0.2
TPM1-206ENST00000358278 EPOPA6NHQ4 379 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 AP5Z1O43299 807 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 CD58P19256 250 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 TRIM21P19474 475 aaKnown RBP16.31■□□□□ 0.2
TPM1-206ENST00000358278 CDH8P55286 799 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 YWHAEP62258 255 aaKnown RBP16.31■□□□□ 0.2
TPM1-206ENST00000358278 DSG1Q02413 1049 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 PDXDC1Q6P996 788 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 GJB7Q6PEY0 223 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 ANKS3Q6ZW76 656 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms