RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CDKL3Q8IVW4 592 aaPredicted RBP18.02■□□□□ 0.48
COL27A1-201ENST00000356083 RGL4Q8IZJ4 473 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 SPIRE2Q8WWL2 714 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 EMSYQ7Z589 1322 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 NMT2O60551 498 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 GLB1LQ6UWU2 654 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 ETNK1Q9HBU6 452 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 WWOXQ9NZC7 414 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 CHURC1-FNTBB4DL54 471 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 ATP5HO75947 161 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 CNBD2Q96M20 576 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 CFAP99D6REC4 459 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 HOXB7P09629 217 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 MTMR2Q13614 643 aa18.02■□□□□ 0.48
COL27A1-201ENST00000356083 HMGCS2P54868 508 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 NR1H3Q13133 447 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 CBFBQ13951 182 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 NEK10Q6ZWH5 1172 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 GOLPH3LQ9H4A5 285 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 KIAA0586Q9BVV6 1533 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 GNASQ5JWF2 1037 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 FOXP4Q8IVH2 680 aaPredicted RBP18.02■□□□□ 0.47
COL27A1-201ENST00000356083 B3GALNT2Q8NCR0 500 aa18.02■□□□□ 0.47
COL27A1-201ENST00000356083 HEATR9A2RTY3 570 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 M0R3G1 203 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 ITGA4P13612 1032 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 TUBGCP3Q96CW5 907 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 PRPF18Q99633 342 aaKnown RBP18.01■□□□□ 0.47
COL27A1-201ENST00000356083 CIPCQ9C0C6 399 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 ABCB6Q9NP58 842 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 EIF2S1P05198 315 aaKnown RBP18.01■□□□□ 0.47
COL27A1-201ENST00000356083 YY1P25490 414 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 NME5P56597 212 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 HDHD2Q9H0R4 259 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 JPH1Q9HDC5 661 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-201ENST00000356083 IZUMO3Q5VZ72 239 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 MICU2Q8IYU8 434 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 SLC44A5Q8NCS7 719 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 TM6SF1Q9BZW5 370 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 PCMTD2Q9NV79 361 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 PMPCBO75439 489 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 PLA2G4AP47712 749 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 VPS37AQ8NEZ2 397 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 C18orf8Q96DM3 657 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 SNF8Q96H20 258 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 NARS2Q96I59 477 aaKnown RBP18.01■□□□□ 0.47
COL27A1-201ENST00000356083 OLFM1Q99784 485 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 STOML1Q9UBI4 398 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 SIK3Q9Y2K2 1263 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 RHOBTB1O94844 696 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 GRK3P35626 688 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 OR8H2Q8N162 312 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 VTI1BQ9UEU0 232 aa18.01■□□□□ 0.47
COL27A1-201ENST00000356083 XPO1O14980 1071 aaKnown RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 ERN1O75460 977 aaKnown RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 YWHABP31946 246 aaKnown RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 CYP4A22Q5TCH4 519 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 GATAD2AQ86YP4 633 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 TSPAN17Q96FV3 270 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 SLITRK1Q96PX8 696 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 CINPQ9BW66 212 aaPredicted RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 FAM96AQ9H5X1 160 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 KLK14Q9P0G3 267 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 COL17A1Q9UMD9 1497 aaPredicted RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 DLGAP3O95886 979 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 STARD3Q14849 445 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 BLOC1S5Q8TDH9 187 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 PARD3Q8TEW0 1356 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 ZBTB5O15062 677 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 NCK2O43639 380 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 ABCB1P08183 1280 aaPredicted RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 ADGRF4Q8IZF3 695 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 DCAF4Q8WV16 495 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 MCEEQ96PE7 176 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 EIF2AK1Q9BQI3 630 aaKnown RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 HDAC6Q9UBN7 1215 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 CDYLQ9Y232 598 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 TDRKHQ9Y2W6 561 aaKnown RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 NPHP3-ACAD11A0A0J9YXS1 232 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 KRT33AO76009 404 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 KATNAL1Q9BW62 490 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 MYLK2Q9H1R3 596 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 ZFYVE28Q9HCC9 887 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 CCDC22O60826 627 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 VCLP18206 1134 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 EN1Q05925 392 aaPredicted RBP18■□□□□ 0.47
COL27A1-201ENST00000356083 NLRP10Q86W26 655 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 RHOT1Q8IXI2 618 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 CARNMT1Q8N4J0 409 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 CYFIP2Q96F07 1278 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 TMEM169Q96HH4 297 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 CNDP1Q96KN2 507 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 SH3GL1Q99961 368 aa18■□□□□ 0.47
COL27A1-201ENST00000356083 CCNE1P24864 410 aa17.99■□□□□ 0.47
COL27A1-201ENST00000356083 TRIM25Q14258 630 aaKnown RBP17.99■□□□□ 0.47
COL27A1-201ENST00000356083 PCYOX1LQ8NBM8 494 aa17.99■□□□□ 0.47
COL27A1-201ENST00000356083 CSTF3Q12996 717 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms