RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SMYD5Q6GMV2 418 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 TAF2Q6P1X5 1199 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 MMS22LQ6ZRQ5 1243 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 KRT12Q99456 494 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 MARCKSL1P49006 195 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 TNNC1P63316 161 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 RBP5P82980 135 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 LIN9Q5TKA1 542 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 TFAP2BQ92481 460 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 VCPIP1Q96JH7 1222 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 RNPC3Q96LT9 517 aaKnown RBP27.35■■□□□ 1.97
CLK2-201ENST00000355560 HINFPQ9BQA5 517 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 AP1M1Q9BXS5 423 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 SPDYE4A6NLX3 237 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 P4HA1P13674 534 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 GLE1Q53GS7 698 aaKnown RBP27.34■■□□□ 1.97
CLK2-201ENST00000355560 CPNE8Q86YQ8 564 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 CAPNS2Q96L46 248 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 WNT8AQ9H1J5 351 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 STIM2Q9P246 746 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 GTF2IRD1Q9UHL9 959 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 LSM8O95777 96 aaKnown RBP27.34■■□□□ 1.97
CLK2-201ENST00000355560 FGGP02679 453 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 SP3Q02447 781 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 C1QBPQ07021 282 aaKnown RBP27.34■■□□□ 1.97
CLK2-201ENST00000355560 NBPF20Q3BBV1 942 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 C1orf131Q8NDD1 294 aaKnown RBP27.34■■□□□ 1.97
CLK2-201ENST00000355560 CD101Q93033 1021 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 ZMAT2Q96NC0 199 aaKnown RBP27.34■■□□□ 1.97
CLK2-201ENST00000355560 TRIM7Q9C029 511 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 TTC7AQ9ULT0 858 aaPredicted RBP27.34■■□□□ 1.97
CLK2-201ENST00000355560 DERAQ9Y315 318 aa27.34■■□□□ 1.97
CLK2-201ENST00000355560 RECQL4O94761 1208 aa27.33■■□□□ 1.97
CLK2-201ENST00000355560 TOMM70O94826 608 aa27.33■■□□□ 1.97
CLK2-201ENST00000355560 PTP4A2Q12974 167 aa27.33■■□□□ 1.97
CLK2-201ENST00000355560 ZNF211Q13398 564 aaPredicted RBP27.33■■□□□ 1.97
CLK2-201ENST00000355560 KLHL7Q8IXQ5 586 aa27.33■■□□□ 1.97
CLK2-201ENST00000355560 RUBCNQ92622 972 aa27.33■■□□□ 1.97
CLK2-201ENST00000355560 APOL6Q9BWW8 343 aa27.33■■□□□ 1.97
CLK2-201ENST00000355560 DNAH12Q6ZR08 3092 aa27.33■■□□□ 1.97
CLK2-201ENST00000355560 KRIT1O00522 736 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 ATP8B1O43520 1251 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 SASH3O75995 380 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 CD19P15391 556 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 FUT8Q9BYC5 575 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 CYP3A43Q9HB55 503 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 HMGXB4Q9UGU5 601 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 PCDHGC3Q9UN70 934 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 MMP8P22894 467 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 RAD23BP54727 409 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 GLRA4Q5JXX5 417 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 TMEM35BQ8NCS4 154 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 UBE2Q2Q8WVN8 375 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 XPNPEP3Q9NQH7 507 aa27.32■■□□□ 1.96
CLK2-201ENST00000355560 ADAMTS4O75173 837 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 CILPO75339 1184 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 STAU1O95793 577 aaKnown RBP27.31■■□□□ 1.96
CLK2-201ENST00000355560 ELNP15502 786 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 AKAP5P24588 427 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 CTNNA1P35221 906 aaKnown RBP27.31■■□□□ 1.96
CLK2-201ENST00000355560 ORC1Q13415 861 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 DEFB115Q30KQ5 88 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 WHAMMQ8TF30 809 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 TWNKQ96RR1 684 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 CELF4Q9BZC1 486 aaKnown RBP27.31■■□□□ 1.96
CLK2-201ENST00000355560 MRPL47Q9HD33 250 aaKnown RBP27.31■■□□□ 1.96
CLK2-201ENST00000355560 RNF186Q9NXI6 227 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 CEP83Q9Y592 693 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 CCDC66A2RUB6 948 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 PAEPP09466 180 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 PRKAR2AP13861 404 aaKnown RBP27.31■■□□□ 1.96
CLK2-201ENST00000355560 CCND3P30281 292 aaPredicted RBP27.31■■□□□ 1.96
CLK2-201ENST00000355560 PEX5P50542 639 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 MAMLD1Q13495 774 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 MAP9Q49MG5 647 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 FAM47CQ5HY64 1035 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 GDF6Q6KF10 455 aaPredicted RBP27.31■■□□□ 1.96
CLK2-201ENST00000355560 ZNF518BQ9C0D4 1074 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 OGFRQ9NZT2 677 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 CNTN3Q9P232 1028 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 TUBGCP4Q9UGJ1 667 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 L1RE1Q9UN81 338 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 SCINQ9Y6U3 715 aa27.31■■□□□ 1.96
CLK2-201ENST00000355560 CCDC188H7C350 402 aa27.3■■□□□ 1.96
CLK2-201ENST00000355560 MYO1FO00160 1098 aa27.3■■□□□ 1.96
CLK2-201ENST00000355560 MYCNP04198 464 aaPredicted RBP27.3■■□□□ 1.96
CLK2-201ENST00000355560 MYBL2P10244 700 aa27.3■■□□□ 1.96
CLK2-201ENST00000355560 PLEKHA7Q6IQ23 1121 aa27.3■■□□□ 1.96
CLK2-201ENST00000355560 GSPT2Q8IYD1 628 aaKnown RBP27.3■■□□□ 1.96
CLK2-201ENST00000355560 M0QZ92 97 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 MED7O43513 233 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 ITGA4P13612 1032 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 CTNNA2P26232 953 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 CDH5P33151 784 aaPredicted RBP27.29■■□□□ 1.96
CLK2-201ENST00000355560 NKX3-2P78367 333 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 MRPS6P82932 125 aaKnown RBP27.29■■□□□ 1.96
CLK2-201ENST00000355560 MYO1EQ12965 1108 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 UBXN11Q5T124 520 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 ALKAL1Q6UXT8 129 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 CCNI2Q6ZMN8 369 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms