RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 AKR1A1P14550 325 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 COPS2P61201 443 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 ASPHQ12797 758 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 PLA2G4FQ68DD2 849 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 ATG4AQ8WYN0 398 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 GPR182O15218 404 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 CCND1P24385 295 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 TNFRSF8P28908 595 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 AGO2Q9UKV8 859 aaKnown RBP12.97□□□□□ -0.33
COLCA1-201ENST00000355430 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
COLCA1-201ENST00000355430 MAGEA4P43358 317 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 KCNMA1Q12791 1236 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 SMYD3Q9H7B4 428 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
COLCA1-201ENST00000355430 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
COLCA1-201ENST00000355430 TAL1P17542 331 aaPredicted RBP12.97□□□□□ -0.33
COLCA1-201ENST00000355430 RIT2Q99578 217 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 RALAP11233 206 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 PPP6R3Q5H9R7 873 aaPredicted RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 SERPINB12Q96P63 405 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 KLC2Q9H0B6 622 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 UBN1Q9NPG3 1134 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 TMEM39AQ9NV64 488 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 SMG5Q9UPR3 1016 aaKnown RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 DSG3P32926 999 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 PTENP60484 403 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 PSMC1P62191 440 aaKnown RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 C1orf146Q5VVC0 180 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 BAP1Q92560 729 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 DDTLA6NHG4 134 aaPredicted RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 CES2O00748 559 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 FNTAP49354 379 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 KCTD19Q17RG1 926 aaPredicted RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 RCOR2Q8IZ40 523 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 SHCBP1Q8NEM2 672 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 DDX50Q9BQ39 737 aaKnown RBP12.96□□□□□ -0.33
COLCA1-201ENST00000355430 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 SLC13A1Q9BZW2 595 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 PCDHGC5Q9Y5F6 944 aa12.96□□□□□ -0.33
COLCA1-201ENST00000355430 NQO1P15559 274 aaKnown RBP12.96□□□□□ -0.34
COLCA1-201ENST00000355430 ACOT2P49753 483 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 EPHB1P54762 984 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 SLC20A2Q08357 652 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 LRRC55Q6ZSA7 311 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 TMEM169Q96HH4 297 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 TAAR1Q96RJ0 339 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 YME1L1Q96TA2 773 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 SEMA4AQ9H3S1 761 aa12.96□□□□□ -0.34
COLCA1-201ENST00000355430 DDX3XO00571 662 aaKnown RBP eCLIP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 GAS2O43903 313 aaKnown RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 GMNNO75496 209 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 PGK2P07205 417 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 ERFP50548 548 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 AGGF1Q8N302 714 aaeCLIP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 TNIP3Q96KP6 325 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 SENP1Q9P0U3 644 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 F5H423 210 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 PRRG1O14668 218 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 PRKCEQ02156 737 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 NT5DC3Q86UY8 548 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 GMCL1Q96IK5 515 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 IDI2Q9BXS1 227 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 TULP2O00295 520 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 P4HA2O15460 535 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 TCF7P36402 384 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 EMC2Q15006 297 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 MMEL1Q495T6 779 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 EFCAB12Q6NXP0 572 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 SPATA2LQ8IUW3 424 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 CNPY4Q8N129 248 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 MTG1Q9BT17 334 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 CDC42EP4Q9H3Q1 356 aaKnown RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 TMEM8AQ9HCN3 771 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 FBXO28Q9NVF7 368 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 BNIP3LO60238 219 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 ADCY3O60266 1144 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 KRT7P08729 469 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 COG7P83436 770 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 ROR1Q01973 937 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 MDH1BQ5I0G3 518 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 ZNF484Q5JVG2 852 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 DNAAF3Q8N9W5 541 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 MED15Q96RN5 788 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 SENP7Q9BQF6 1050 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms